Gene : Bostr.7128s0425 B. stricta v1.2

Defline:  (1 of 1) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  425
Name:  ? Bostr.7128s0425 Secondary Identifier:  ? PAC:30660769

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0425 0.5kb upstream 0.5kb upstream 7996 true Scaffold7128: 1903454-1911449 Boechera stricta
Bostr.7128s0425 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 1910950-1911449 Boechera stricta
Bostr.7128s0425 0.5kb downstream 0.5kb downstream 7996 true Scaffold7128: 1902954-1910949 Boechera stricta
Bostr.7128s0425 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 1902954-1903453 Boechera stricta
Bostr.7128s0425 1.0kb upstream 1.0kb upstream 8496 true Scaffold7128: 1903454-1911949 Boechera stricta
Bostr.7128s0425 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 1910950-1911949 Boechera stricta
Bostr.7128s0425 1.0kb downstream 1.0kb downstream 8496 true Scaffold7128: 1902454-1910949 Boechera stricta
Bostr.7128s0425 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 1902454-1903453 Boechera stricta
Bostr.7128s0425 2.0kb upstream 2.0kb upstream 9496 true Scaffold7128: 1903454-1912949 Boechera stricta
Bostr.7128s0425 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 1910950-1912949 Boechera stricta
Bostr.7128s0425 2.0kb downstream 2.0kb downstream 9496 true Scaffold7128: 1901454-1910949 Boechera stricta
Bostr.7128s0425 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 1901454-1903453 Boechera stricta
Bostr.7128s0425 5.0kb upstream 5.0kb upstream 12496 true Scaffold7128: 1903454-1915949 Boechera stricta
Bostr.7128s0425 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 1910950-1915949 Boechera stricta
Bostr.7128s0425 5.0kb downstream 5.0kb downstream 12496 true Scaffold7128: 1898454-1910949 Boechera stricta
Bostr.7128s0425 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 1898454-1903453 Boechera stricta
Bostr.7128s0425 10.0kb upstream 10.0kb upstream 17496 true Scaffold7128: 1903454-1920949 Boechera stricta
Bostr.7128s0425 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 1910950-1920949 Boechera stricta
Bostr.7128s0425 10.0kb downstream 10.0kb downstream 17496 true Scaffold7128: 1893454-1910949 Boechera stricta
Bostr.7128s0425 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 1893454-1903453 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122340133 5261 Brassicaceae Singleton cluster - no MSA
123780584 5264 Brassicales-Malvales Singleton cluster - no MSA
124278887 5266 SBM Singleton cluster - no MSA
124133903 5268 Malvidae Singleton cluster - no MSA
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain