Gene : Bostr.7128s0438 B. stricta v1.2
Defline:  (1 of 2) PTHR11614//PTHR11614:SF97 - PHOSPHOLIPASE-RELATED Genomic Order:  438
Name:  ? Bostr.7128s0438 Secondary Identifier:  ? PAC:30660198
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta LIPAS-PWY Boechera stricta pathologic  
Bstricta PWY-7420 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0438 0.5kb upstream 0.5kb upstream 3150 true Scaffold7128: 1964464-1967613 Boechera stricta
Bostr.7128s0438 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 1967114-1967613 Boechera stricta
Bostr.7128s0438 0.5kb downstream 0.5kb downstream 3150 true Scaffold7128: 1963964-1967113 Boechera stricta
Bostr.7128s0438 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 1963964-1964463 Boechera stricta
Bostr.7128s0438 1.0kb upstream 1.0kb upstream 3650 true Scaffold7128: 1964464-1968113 Boechera stricta
Bostr.7128s0438 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 1967114-1968113 Boechera stricta
Bostr.7128s0438 1.0kb downstream 1.0kb downstream 3650 true Scaffold7128: 1963464-1967113 Boechera stricta
Bostr.7128s0438 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 1963464-1964463 Boechera stricta
Bostr.7128s0438 2.0kb upstream 2.0kb upstream 4650 true Scaffold7128: 1964464-1969113 Boechera stricta
Bostr.7128s0438 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 1967114-1969113 Boechera stricta
Bostr.7128s0438 2.0kb downstream 2.0kb downstream 4650 true Scaffold7128: 1962464-1967113 Boechera stricta
Bostr.7128s0438 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 1962464-1964463 Boechera stricta
Bostr.7128s0438 5.0kb upstream 5.0kb upstream 7650 true Scaffold7128: 1964464-1972113 Boechera stricta
Bostr.7128s0438 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 1967114-1972113 Boechera stricta
Bostr.7128s0438 5.0kb downstream 5.0kb downstream 7650 true Scaffold7128: 1959464-1967113 Boechera stricta
Bostr.7128s0438 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 1959464-1964463 Boechera stricta
Bostr.7128s0438 10.0kb upstream 10.0kb upstream 12650 true Scaffold7128: 1964464-1977113 Boechera stricta
Bostr.7128s0438 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 1967114-1977113 Boechera stricta
Bostr.7128s0438 10.0kb downstream 10.0kb downstream 12650 true Scaffold7128: 1954464-1967113 Boechera stricta
Bostr.7128s0438 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 1954464-1964463 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371734 5261 Brassicaceae View MSA
123800221 5264 Brassicales-Malvales View MSA
124297663 5266 SBM View MSA
124149494 5268 Malvidae View MSA
123875295 5270 Rosid View MSA
123459143 5271 Pentapetalae View MSA
122494538 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain