Gene : Bostr.7305s0057 B. stricta v1.2
Defline:  (1 of 57) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  57
Name:  ? Bostr.7305s0057 Secondary Identifier:  ? PAC:30678023
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7305s0057 0.5kb upstream 0.5kb upstream 12847 true Scaffold7305: 379425-392271 Boechera stricta
Bostr.7305s0057 0.5kb upstream 0.5kb upstream 500 false Scaffold7305: 379425-379924 Boechera stricta
Bostr.7305s0057 0.5kb downstream 0.5kb downstream 12847 true Scaffold7305: 379925-392771 Boechera stricta
Bostr.7305s0057 0.5kb downstream 0.5kb downstream 500 false Scaffold7305: 392272-392771 Boechera stricta
Bostr.7305s0057 1.0kb upstream 1.0kb upstream 13347 true Scaffold7305: 378925-392271 Boechera stricta
Bostr.7305s0057 1.0kb upstream 1.0kb upstream 1000 false Scaffold7305: 378925-379924 Boechera stricta
Bostr.7305s0057 1.0kb downstream 1.0kb downstream 13347 true Scaffold7305: 379925-393271 Boechera stricta
Bostr.7305s0057 1.0kb downstream 1.0kb downstream 1000 false Scaffold7305: 392272-393271 Boechera stricta
Bostr.7305s0057 2.0kb upstream 2.0kb upstream 14347 true Scaffold7305: 377925-392271 Boechera stricta
Bostr.7305s0057 2.0kb upstream 2.0kb upstream 2000 false Scaffold7305: 377925-379924 Boechera stricta
Bostr.7305s0057 2.0kb downstream 2.0kb downstream 14347 true Scaffold7305: 379925-394271 Boechera stricta
Bostr.7305s0057 2.0kb downstream 2.0kb downstream 2000 false Scaffold7305: 392272-394271 Boechera stricta
Bostr.7305s0057 5.0kb upstream 5.0kb upstream 17347 true Scaffold7305: 374925-392271 Boechera stricta
Bostr.7305s0057 5.0kb upstream 5.0kb upstream 5000 false Scaffold7305: 374925-379924 Boechera stricta
Bostr.7305s0057 5.0kb downstream 5.0kb downstream 17347 true Scaffold7305: 379925-397271 Boechera stricta
Bostr.7305s0057 5.0kb downstream 5.0kb downstream 5000 false Scaffold7305: 392272-397271 Boechera stricta
Bostr.7305s0057 10.0kb upstream 10.0kb upstream 22347 true Scaffold7305: 369925-392271 Boechera stricta
Bostr.7305s0057 10.0kb upstream 10.0kb upstream 10000 false Scaffold7305: 369925-379924 Boechera stricta
Bostr.7305s0057 10.0kb downstream 10.0kb downstream 22347 true Scaffold7305: 379925-402271 Boechera stricta
Bostr.7305s0057 10.0kb downstream 10.0kb downstream 10000 false Scaffold7305: 392272-402271 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372058 5261 Brassicaceae View MSA
123831060 5264 Brassicales-Malvales View MSA
124341624 5266 SBM View MSA
124252420 5268 Malvidae View MSA
124072779 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain