Gene : Bostr.7200s0136 B. stricta v1.2

Defline:  (1 of 1) KOG2463 - Predicted RNA-binding protein Nob1p involved in 26S proteasome assembly Genomic Order:  136
Name:  ? Bostr.7200s0136 Secondary Identifier:  ? PAC:30668569

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7200s0136 0.5kb upstream 0.5kb upstream 3160 true Scaffold7200: 1013774-1016933 Boechera stricta
Bostr.7200s0136 0.5kb upstream 0.5kb upstream 500 false Scaffold7200: 1016434-1016933 Boechera stricta
Bostr.7200s0136 0.5kb downstream 0.5kb downstream 3160 true Scaffold7200: 1013274-1016433 Boechera stricta
Bostr.7200s0136 0.5kb downstream 0.5kb downstream 500 false Scaffold7200: 1013274-1013773 Boechera stricta
Bostr.7200s0136 1.0kb upstream 1.0kb upstream 3660 true Scaffold7200: 1013774-1017433 Boechera stricta
Bostr.7200s0136 1.0kb upstream 1.0kb upstream 1000 false Scaffold7200: 1016434-1017433 Boechera stricta
Bostr.7200s0136 1.0kb downstream 1.0kb downstream 3660 true Scaffold7200: 1012774-1016433 Boechera stricta
Bostr.7200s0136 1.0kb downstream 1.0kb downstream 1000 false Scaffold7200: 1012774-1013773 Boechera stricta
Bostr.7200s0136 2.0kb upstream 2.0kb upstream 4660 true Scaffold7200: 1013774-1018433 Boechera stricta
Bostr.7200s0136 2.0kb upstream 2.0kb upstream 2000 false Scaffold7200: 1016434-1018433 Boechera stricta
Bostr.7200s0136 2.0kb downstream 2.0kb downstream 4660 true Scaffold7200: 1011774-1016433 Boechera stricta
Bostr.7200s0136 2.0kb downstream 2.0kb downstream 2000 false Scaffold7200: 1011774-1013773 Boechera stricta
Bostr.7200s0136 5.0kb upstream 5.0kb upstream 7660 true Scaffold7200: 1013774-1021433 Boechera stricta
Bostr.7200s0136 5.0kb upstream 5.0kb upstream 5000 false Scaffold7200: 1016434-1021433 Boechera stricta
Bostr.7200s0136 5.0kb downstream 5.0kb downstream 7660 true Scaffold7200: 1008774-1016433 Boechera stricta
Bostr.7200s0136 5.0kb downstream 5.0kb downstream 5000 false Scaffold7200: 1008774-1013773 Boechera stricta
Bostr.7200s0136 10.0kb upstream 10.0kb upstream 12660 true Scaffold7200: 1013774-1026433 Boechera stricta
Bostr.7200s0136 10.0kb upstream 10.0kb upstream 10000 false Scaffold7200: 1016434-1026433 Boechera stricta
Bostr.7200s0136 10.0kb downstream 10.0kb downstream 12660 true Scaffold7200: 1003774-1016433 Boechera stricta
Bostr.7200s0136 10.0kb downstream 10.0kb downstream 10000 false Scaffold7200: 1003774-1013773 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041459 5273 Angiosperm View MSA
122361115 5261 Brassicaceae View MSA
123832543 5264 Brassicales-Malvales View MSA
124342524 5266 SBM View MSA
124237613 5268 Malvidae View MSA
124063585 5270 Rosid View MSA
123741219 5271 Pentapetalae View MSA
122790969 5272 Eudicot View MSA
121349928 5274 Embryophyte View MSA
123425485 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain