Gene : Bostr.7128s0690 B. stricta v1.2
Defline:  (1 of 1) PTHR13871:SF43 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Genomic Order:  690
Name:  ? Bostr.7128s0690 Secondary Identifier:  ? PAC:30660608
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7039 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0690 0.5kb upstream 0.5kb upstream 2908 true Scaffold7128: 3270908-3273815 Boechera stricta
Bostr.7128s0690 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 3273316-3273815 Boechera stricta
Bostr.7128s0690 0.5kb downstream 0.5kb downstream 2908 true Scaffold7128: 3270408-3273315 Boechera stricta
Bostr.7128s0690 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 3270408-3270907 Boechera stricta
Bostr.7128s0690 1.0kb upstream 1.0kb upstream 3408 true Scaffold7128: 3270908-3274315 Boechera stricta
Bostr.7128s0690 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 3273316-3274315 Boechera stricta
Bostr.7128s0690 1.0kb downstream 1.0kb downstream 3408 true Scaffold7128: 3269908-3273315 Boechera stricta
Bostr.7128s0690 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 3269908-3270907 Boechera stricta
Bostr.7128s0690 2.0kb upstream 2.0kb upstream 4408 true Scaffold7128: 3270908-3275315 Boechera stricta
Bostr.7128s0690 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 3273316-3275315 Boechera stricta
Bostr.7128s0690 2.0kb downstream 2.0kb downstream 4408 true Scaffold7128: 3268908-3273315 Boechera stricta
Bostr.7128s0690 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 3268908-3270907 Boechera stricta
Bostr.7128s0690 5.0kb upstream 5.0kb upstream 7408 true Scaffold7128: 3270908-3278315 Boechera stricta
Bostr.7128s0690 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 3273316-3278315 Boechera stricta
Bostr.7128s0690 5.0kb downstream 5.0kb downstream 7408 true Scaffold7128: 3265908-3273315 Boechera stricta
Bostr.7128s0690 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 3265908-3270907 Boechera stricta
Bostr.7128s0690 10.0kb upstream 10.0kb upstream 12408 true Scaffold7128: 3270908-3283315 Boechera stricta
Bostr.7128s0690 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 3273316-3283315 Boechera stricta
Bostr.7128s0690 10.0kb downstream 10.0kb downstream 12408 true Scaffold7128: 3260908-3273315 Boechera stricta
Bostr.7128s0690 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 3260908-3270907 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368030 5261 Brassicaceae View MSA
123840186 5264 Brassicales-Malvales View MSA
124340169 5266 SBM View MSA
124239800 5268 Malvidae View MSA
124061388 5270 Rosid View MSA
123737887 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain