Gene : Bostr.7128s0347 B. stricta v1.2
Defline:  (1 of 3) PTHR31008:SF3 - COP1-INTERACTING PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  347
Name:  ? Bostr.7128s0347 Secondary Identifier:  ? PAC:30660459
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0347 0.5kb upstream 0.5kb upstream 5342 true Scaffold7128: 1542679-1548020 Boechera stricta
Bostr.7128s0347 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 1542679-1543178 Boechera stricta
Bostr.7128s0347 0.5kb downstream 0.5kb downstream 5342 true Scaffold7128: 1543179-1548520 Boechera stricta
Bostr.7128s0347 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 1548021-1548520 Boechera stricta
Bostr.7128s0347 1.0kb upstream 1.0kb upstream 5842 true Scaffold7128: 1542179-1548020 Boechera stricta
Bostr.7128s0347 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 1542179-1543178 Boechera stricta
Bostr.7128s0347 1.0kb downstream 1.0kb downstream 5842 true Scaffold7128: 1543179-1549020 Boechera stricta
Bostr.7128s0347 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 1548021-1549020 Boechera stricta
Bostr.7128s0347 2.0kb upstream 2.0kb upstream 6842 true Scaffold7128: 1541179-1548020 Boechera stricta
Bostr.7128s0347 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 1541179-1543178 Boechera stricta
Bostr.7128s0347 2.0kb downstream 2.0kb downstream 6842 true Scaffold7128: 1543179-1550020 Boechera stricta
Bostr.7128s0347 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 1548021-1550020 Boechera stricta
Bostr.7128s0347 5.0kb upstream 5.0kb upstream 9842 true Scaffold7128: 1538179-1548020 Boechera stricta
Bostr.7128s0347 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 1538179-1543178 Boechera stricta
Bostr.7128s0347 5.0kb downstream 5.0kb downstream 9842 true Scaffold7128: 1543179-1553020 Boechera stricta
Bostr.7128s0347 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 1548021-1553020 Boechera stricta
Bostr.7128s0347 10.0kb upstream 10.0kb upstream 14842 true Scaffold7128: 1533179-1548020 Boechera stricta
Bostr.7128s0347 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 1533179-1543178 Boechera stricta
Bostr.7128s0347 10.0kb downstream 10.0kb downstream 14842 true Scaffold7128: 1543179-1558020 Boechera stricta
Bostr.7128s0347 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 1548021-1558020 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360359 5261 Brassicaceae View MSA
123797940 5264 Brassicales-Malvales View MSA
124295637 5266 SBM View MSA
124251623 5268 Malvidae View MSA
124070250 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain