Gene : Bostr.7128s0578 B. stricta v1.2

Defline:  (1 of 5) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  578
Name:  ? Bostr.7128s0578 Secondary Identifier:  ? PAC:30660625

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0578 0.5kb upstream 0.5kb upstream 2746 true Scaffold7128: 2634614-2637359 Boechera stricta
Bostr.7128s0578 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 2636860-2637359 Boechera stricta
Bostr.7128s0578 0.5kb downstream 0.5kb downstream 2746 true Scaffold7128: 2634114-2636859 Boechera stricta
Bostr.7128s0578 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 2634114-2634613 Boechera stricta
Bostr.7128s0578 1.0kb upstream 1.0kb upstream 3246 true Scaffold7128: 2634614-2637859 Boechera stricta
Bostr.7128s0578 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 2636860-2637859 Boechera stricta
Bostr.7128s0578 1.0kb downstream 1.0kb downstream 3246 true Scaffold7128: 2633614-2636859 Boechera stricta
Bostr.7128s0578 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 2633614-2634613 Boechera stricta
Bostr.7128s0578 2.0kb upstream 2.0kb upstream 4246 true Scaffold7128: 2634614-2638859 Boechera stricta
Bostr.7128s0578 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 2636860-2638859 Boechera stricta
Bostr.7128s0578 2.0kb downstream 2.0kb downstream 4246 true Scaffold7128: 2632614-2636859 Boechera stricta
Bostr.7128s0578 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 2632614-2634613 Boechera stricta
Bostr.7128s0578 5.0kb upstream 5.0kb upstream 7246 true Scaffold7128: 2634614-2641859 Boechera stricta
Bostr.7128s0578 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 2636860-2641859 Boechera stricta
Bostr.7128s0578 5.0kb downstream 5.0kb downstream 7246 true Scaffold7128: 2629614-2636859 Boechera stricta
Bostr.7128s0578 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 2629614-2634613 Boechera stricta
Bostr.7128s0578 10.0kb upstream 10.0kb upstream 12246 true Scaffold7128: 2634614-2646859 Boechera stricta
Bostr.7128s0578 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 2636860-2646859 Boechera stricta
Bostr.7128s0578 10.0kb downstream 10.0kb downstream 12246 true Scaffold7128: 2624614-2636859 Boechera stricta
Bostr.7128s0578 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 2624614-2634613 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366901 5261 Brassicaceae View MSA
123838633 5264 Brassicales-Malvales View MSA
124340064 5266 SBM View MSA
124251663 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain