Gene : Bostr.7867s0529 B. stricta v1.2
Defline:  (1 of 2) PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Genomic Order:  529
Name:  ? Bostr.7867s0529 Secondary Identifier:  ? PAC:30658208
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRPSYN-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0529 0.5kb upstream 0.5kb upstream 2710 true Scaffold7867: 2661999-2664708 Boechera stricta
Bostr.7867s0529 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 2661999-2662498 Boechera stricta
Bostr.7867s0529 0.5kb downstream 0.5kb downstream 2710 true Scaffold7867: 2662499-2665208 Boechera stricta
Bostr.7867s0529 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 2664709-2665208 Boechera stricta
Bostr.7867s0529 1.0kb upstream 1.0kb upstream 3210 true Scaffold7867: 2661499-2664708 Boechera stricta
Bostr.7867s0529 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 2661499-2662498 Boechera stricta
Bostr.7867s0529 1.0kb downstream 1.0kb downstream 3210 true Scaffold7867: 2662499-2665708 Boechera stricta
Bostr.7867s0529 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 2664709-2665708 Boechera stricta
Bostr.7867s0529 2.0kb upstream 2.0kb upstream 4210 true Scaffold7867: 2660499-2664708 Boechera stricta
Bostr.7867s0529 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 2660499-2662498 Boechera stricta
Bostr.7867s0529 2.0kb downstream 2.0kb downstream 4210 true Scaffold7867: 2662499-2666708 Boechera stricta
Bostr.7867s0529 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 2664709-2666708 Boechera stricta
Bostr.7867s0529 5.0kb upstream 5.0kb upstream 7210 true Scaffold7867: 2657499-2664708 Boechera stricta
Bostr.7867s0529 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 2657499-2662498 Boechera stricta
Bostr.7867s0529 5.0kb downstream 5.0kb downstream 7210 true Scaffold7867: 2662499-2669708 Boechera stricta
Bostr.7867s0529 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 2664709-2669708 Boechera stricta
Bostr.7867s0529 10.0kb upstream 10.0kb upstream 12210 true Scaffold7867: 2652499-2664708 Boechera stricta
Bostr.7867s0529 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 2652499-2662498 Boechera stricta
Bostr.7867s0529 10.0kb downstream 10.0kb downstream 12210 true Scaffold7867: 2662499-2674708 Boechera stricta
Bostr.7867s0529 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 2664709-2674708 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360567 5261 Brassicaceae View MSA
123837173 5264 Brassicales-Malvales View MSA
124344388 5266 SBM View MSA
124250400 5268 Malvidae View MSA
124062384 5270 Rosid View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain