Gene : Bostr.7867s0449 B. stricta v1.2
Defline:  (1 of 6) 6.1.1.19 - Arginine--tRNA ligase / Arginyl-tRNA synthetase Genomic Order:  449
Name:  ? Bostr.7867s0449 Secondary Identifier:  ? PAC:30658526
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0449 0.5kb upstream 0.5kb upstream 4978 true Scaffold7867: 2305637-2310614 Boechera stricta
Bostr.7867s0449 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 2310115-2310614 Boechera stricta
Bostr.7867s0449 0.5kb downstream 0.5kb downstream 4978 true Scaffold7867: 2305137-2310114 Boechera stricta
Bostr.7867s0449 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 2305137-2305636 Boechera stricta
Bostr.7867s0449 1.0kb upstream 1.0kb upstream 5478 true Scaffold7867: 2305637-2311114 Boechera stricta
Bostr.7867s0449 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 2310115-2311114 Boechera stricta
Bostr.7867s0449 1.0kb downstream 1.0kb downstream 5478 true Scaffold7867: 2304637-2310114 Boechera stricta
Bostr.7867s0449 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 2304637-2305636 Boechera stricta
Bostr.7867s0449 2.0kb upstream 2.0kb upstream 6478 true Scaffold7867: 2305637-2312114 Boechera stricta
Bostr.7867s0449 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 2310115-2312114 Boechera stricta
Bostr.7867s0449 2.0kb downstream 2.0kb downstream 6478 true Scaffold7867: 2303637-2310114 Boechera stricta
Bostr.7867s0449 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 2303637-2305636 Boechera stricta
Bostr.7867s0449 5.0kb upstream 5.0kb upstream 9478 true Scaffold7867: 2305637-2315114 Boechera stricta
Bostr.7867s0449 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 2310115-2315114 Boechera stricta
Bostr.7867s0449 5.0kb downstream 5.0kb downstream 9478 true Scaffold7867: 2300637-2310114 Boechera stricta
Bostr.7867s0449 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 2300637-2305636 Boechera stricta
Bostr.7867s0449 10.0kb upstream 10.0kb upstream 14478 true Scaffold7867: 2305637-2320114 Boechera stricta
Bostr.7867s0449 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 2310115-2320114 Boechera stricta
Bostr.7867s0449 10.0kb downstream 10.0kb downstream 14478 true Scaffold7867: 2295637-2310114 Boechera stricta
Bostr.7867s0449 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 2295637-2305636 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381542 5261 Brassicaceae View MSA
123837210 5264 Brassicales-Malvales View MSA
124337700 5266 SBM View MSA
124238574 5268 Malvidae View MSA
124068746 5270 Rosid View MSA
123739648 5271 Pentapetalae View MSA
122789806 5272 Eudicot View MSA
122042876 5273 Angiosperm View MSA
121345157 5274 Embryophyte View MSA
123426289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain