Gene : Bostr.7867s0317 B. stricta v1.2
Defline:  (1 of 2) PTHR11404:SF24 - SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTIC Genomic Order:  317
Name:  ? Bostr.7867s0317 Secondary Identifier:  ? PAC:30657809
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta DETOX1-PWY Boechera stricta pathologic  
Bstricta DETOX1-PWY-1 Boechera stricta pathologic  
Bstricta PWY-6854 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0317 0.5kb upstream 0.5kb upstream 2389 true Scaffold7867: 1688239-1690627 Boechera stricta
Bostr.7867s0317 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 1690128-1690627 Boechera stricta
Bostr.7867s0317 0.5kb downstream 0.5kb downstream 2389 true Scaffold7867: 1687739-1690127 Boechera stricta
Bostr.7867s0317 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 1687739-1688238 Boechera stricta
Bostr.7867s0317 1.0kb upstream 1.0kb upstream 2889 true Scaffold7867: 1688239-1691127 Boechera stricta
Bostr.7867s0317 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 1690128-1691127 Boechera stricta
Bostr.7867s0317 1.0kb downstream 1.0kb downstream 2889 true Scaffold7867: 1687239-1690127 Boechera stricta
Bostr.7867s0317 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 1687239-1688238 Boechera stricta
Bostr.7867s0317 2.0kb upstream 2.0kb upstream 3889 true Scaffold7867: 1688239-1692127 Boechera stricta
Bostr.7867s0317 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 1690128-1692127 Boechera stricta
Bostr.7867s0317 2.0kb downstream 2.0kb downstream 3889 true Scaffold7867: 1686239-1690127 Boechera stricta
Bostr.7867s0317 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 1686239-1688238 Boechera stricta
Bostr.7867s0317 5.0kb upstream 5.0kb upstream 6889 true Scaffold7867: 1688239-1695127 Boechera stricta
Bostr.7867s0317 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 1690128-1695127 Boechera stricta
Bostr.7867s0317 5.0kb downstream 5.0kb downstream 6889 true Scaffold7867: 1683239-1690127 Boechera stricta
Bostr.7867s0317 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 1683239-1688238 Boechera stricta
Bostr.7867s0317 10.0kb upstream 10.0kb upstream 11889 true Scaffold7867: 1688239-1700127 Boechera stricta
Bostr.7867s0317 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 1690128-1700127 Boechera stricta
Bostr.7867s0317 10.0kb downstream 10.0kb downstream 11889 true Scaffold7867: 1678239-1690127 Boechera stricta
Bostr.7867s0317 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 1678239-1688238 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370198 5261 Brassicaceae View MSA
123799915 5264 Brassicales-Malvales View MSA
124297385 5266 SBM View MSA
124149294 5268 Malvidae View MSA
124072391 5270 Rosid View MSA
123741409 5271 Pentapetalae View MSA
122787652 5272 Eudicot View MSA
122047747 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain