Gene : Bostr.7867s0159 B. stricta v1.2

Defline:  (1 of 1) PTHR33284:SF1 - RIBOSOMAL L25/TL5/CTC N-TERMINAL 5S RRNA BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  159
Name:  ? Bostr.7867s0159 Secondary Identifier:  ? PAC:30657358

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0159 0.5kb upstream 0.5kb upstream 2598 true Scaffold7867: 961934-964531 Boechera stricta
Bostr.7867s0159 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 964032-964531 Boechera stricta
Bostr.7867s0159 0.5kb downstream 0.5kb downstream 2598 true Scaffold7867: 961434-964031 Boechera stricta
Bostr.7867s0159 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 961434-961933 Boechera stricta
Bostr.7867s0159 1.0kb upstream 1.0kb upstream 3098 true Scaffold7867: 961934-965031 Boechera stricta
Bostr.7867s0159 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 964032-965031 Boechera stricta
Bostr.7867s0159 1.0kb downstream 1.0kb downstream 3098 true Scaffold7867: 960934-964031 Boechera stricta
Bostr.7867s0159 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 960934-961933 Boechera stricta
Bostr.7867s0159 2.0kb upstream 2.0kb upstream 4098 true Scaffold7867: 961934-966031 Boechera stricta
Bostr.7867s0159 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 964032-966031 Boechera stricta
Bostr.7867s0159 2.0kb downstream 2.0kb downstream 4098 true Scaffold7867: 959934-964031 Boechera stricta
Bostr.7867s0159 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 959934-961933 Boechera stricta
Bostr.7867s0159 5.0kb upstream 5.0kb upstream 7098 true Scaffold7867: 961934-969031 Boechera stricta
Bostr.7867s0159 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 964032-969031 Boechera stricta
Bostr.7867s0159 5.0kb downstream 5.0kb downstream 7098 true Scaffold7867: 956934-964031 Boechera stricta
Bostr.7867s0159 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 956934-961933 Boechera stricta
Bostr.7867s0159 10.0kb upstream 10.0kb upstream 12098 true Scaffold7867: 961934-974031 Boechera stricta
Bostr.7867s0159 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 964032-974031 Boechera stricta
Bostr.7867s0159 10.0kb downstream 10.0kb downstream 12098 true Scaffold7867: 951934-964031 Boechera stricta
Bostr.7867s0159 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 951934-961933 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368354 5261 Brassicaceae View MSA
123832401 5264 Brassicales-Malvales View MSA
124341331 5266 SBM View MSA
124240980 5268 Malvidae View MSA
124062283 5270 Rosid View MSA
123743591 5271 Pentapetalae View MSA
122793831 5272 Eudicot View MSA
122044337 5273 Angiosperm View MSA
121344036 5274 Embryophyte View MSA
123426023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain