Gene : Bostr.7867s0056 B. stricta v1.2
Defline:  (1 of 2) PTHR11735:SF14 - TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE-RELATED Genomic Order:  56
Name:  ? Bostr.7867s0056 Secondary Identifier:  ? PAC:30658520
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY0-1587 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s0056 0.5kb upstream 0.5kb upstream 1415 true Scaffold7867: 328564-329978 Boechera stricta
Bostr.7867s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 328564-329063 Boechera stricta
Bostr.7867s0056 0.5kb downstream 0.5kb downstream 1415 true Scaffold7867: 329064-330478 Boechera stricta
Bostr.7867s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 329979-330478 Boechera stricta
Bostr.7867s0056 1.0kb upstream 1.0kb upstream 1915 true Scaffold7867: 328064-329978 Boechera stricta
Bostr.7867s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 328064-329063 Boechera stricta
Bostr.7867s0056 1.0kb downstream 1.0kb downstream 1915 true Scaffold7867: 329064-330978 Boechera stricta
Bostr.7867s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 329979-330978 Boechera stricta
Bostr.7867s0056 2.0kb upstream 2.0kb upstream 2915 true Scaffold7867: 327064-329978 Boechera stricta
Bostr.7867s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 327064-329063 Boechera stricta
Bostr.7867s0056 2.0kb downstream 2.0kb downstream 2915 true Scaffold7867: 329064-331978 Boechera stricta
Bostr.7867s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 329979-331978 Boechera stricta
Bostr.7867s0056 5.0kb upstream 5.0kb upstream 5915 true Scaffold7867: 324064-329978 Boechera stricta
Bostr.7867s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 324064-329063 Boechera stricta
Bostr.7867s0056 5.0kb downstream 5.0kb downstream 5915 true Scaffold7867: 329064-334978 Boechera stricta
Bostr.7867s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 329979-334978 Boechera stricta
Bostr.7867s0056 10.0kb upstream 10.0kb upstream 10915 true Scaffold7867: 319064-329978 Boechera stricta
Bostr.7867s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 319064-329063 Boechera stricta
Bostr.7867s0056 10.0kb downstream 10.0kb downstream 10915 true Scaffold7867: 329064-339978 Boechera stricta
Bostr.7867s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 329979-339978 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792089 5273 Angiosperm View MSA
122339890 5261 Brassicaceae Singleton cluster - no MSA
123780359 5264 Brassicales-Malvales Singleton cluster - no MSA
124278667 5266 SBM Singleton cluster - no MSA
124252423 5268 Malvidae View MSA
124073168 5270 Rosid View MSA
123743876 5271 Pentapetalae View MSA
122796342 5272 Eudicot View MSA
121063343 5274 Embryophyte View MSA
123103100 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain