Gene : Bostr.7867s1491 B. stricta v1.2

Defline:  (1 of 5) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  1491
Name:  ? Bostr.7867s1491 Secondary Identifier:  ? PAC:30657856

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1491 0.5kb upstream 0.5kb upstream 2823 true Scaffold7867: 7527664-7530486 Boechera stricta
Bostr.7867s1491 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 7529987-7530486 Boechera stricta
Bostr.7867s1491 0.5kb downstream 0.5kb downstream 2823 true Scaffold7867: 7527164-7529986 Boechera stricta
Bostr.7867s1491 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 7527164-7527663 Boechera stricta
Bostr.7867s1491 1.0kb upstream 1.0kb upstream 3323 true Scaffold7867: 7527664-7530986 Boechera stricta
Bostr.7867s1491 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 7529987-7530986 Boechera stricta
Bostr.7867s1491 1.0kb downstream 1.0kb downstream 3323 true Scaffold7867: 7526664-7529986 Boechera stricta
Bostr.7867s1491 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 7526664-7527663 Boechera stricta
Bostr.7867s1491 2.0kb upstream 2.0kb upstream 4323 true Scaffold7867: 7527664-7531986 Boechera stricta
Bostr.7867s1491 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 7529987-7531986 Boechera stricta
Bostr.7867s1491 2.0kb downstream 2.0kb downstream 4323 true Scaffold7867: 7525664-7529986 Boechera stricta
Bostr.7867s1491 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 7525664-7527663 Boechera stricta
Bostr.7867s1491 5.0kb upstream 5.0kb upstream 7323 true Scaffold7867: 7527664-7534986 Boechera stricta
Bostr.7867s1491 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 7529987-7534986 Boechera stricta
Bostr.7867s1491 5.0kb downstream 5.0kb downstream 7323 true Scaffold7867: 7522664-7529986 Boechera stricta
Bostr.7867s1491 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 7522664-7527663 Boechera stricta
Bostr.7867s1491 10.0kb upstream 10.0kb upstream 12323 true Scaffold7867: 7527664-7539986 Boechera stricta
Bostr.7867s1491 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 7529987-7539986 Boechera stricta
Bostr.7867s1491 10.0kb downstream 10.0kb downstream 12323 true Scaffold7867: 7517664-7529986 Boechera stricta
Bostr.7867s1491 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 7517664-7527663 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375383 5261 Brassicaceae View MSA
123800944 5264 Brassicales-Malvales View MSA
124298299 5266 SBM View MSA
124149972 5268 Malvidae View MSA
124051795 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain