Gene : Bostr.7867s1503 B. stricta v1.2

Defline:  (1 of 2) PTHR31388:SF16 - PEROXIDASE 14-RELATED Genomic Order:  1503
Name:  ? Bostr.7867s1503 Secondary Identifier:  ? PAC:30657724

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  
Bstricta PWY-7214 Boechera stricta pathologic  
Bstricta PWY-7445 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1503 0.5kb upstream 0.5kb upstream 2034 true Scaffold7867: 7591082-7593115 Boechera stricta
Bostr.7867s1503 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 7592616-7593115 Boechera stricta
Bostr.7867s1503 0.5kb downstream 0.5kb downstream 2034 true Scaffold7867: 7590582-7592615 Boechera stricta
Bostr.7867s1503 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 7590582-7591081 Boechera stricta
Bostr.7867s1503 1.0kb upstream 1.0kb upstream 2534 true Scaffold7867: 7591082-7593615 Boechera stricta
Bostr.7867s1503 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 7592616-7593615 Boechera stricta
Bostr.7867s1503 1.0kb downstream 1.0kb downstream 2534 true Scaffold7867: 7590082-7592615 Boechera stricta
Bostr.7867s1503 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 7590082-7591081 Boechera stricta
Bostr.7867s1503 2.0kb upstream 2.0kb upstream 3534 true Scaffold7867: 7591082-7594615 Boechera stricta
Bostr.7867s1503 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 7592616-7594615 Boechera stricta
Bostr.7867s1503 2.0kb downstream 2.0kb downstream 3534 true Scaffold7867: 7589082-7592615 Boechera stricta
Bostr.7867s1503 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 7589082-7591081 Boechera stricta
Bostr.7867s1503 5.0kb upstream 5.0kb upstream 6534 true Scaffold7867: 7591082-7597615 Boechera stricta
Bostr.7867s1503 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 7592616-7597615 Boechera stricta
Bostr.7867s1503 5.0kb downstream 5.0kb downstream 6534 true Scaffold7867: 7586082-7592615 Boechera stricta
Bostr.7867s1503 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 7586082-7591081 Boechera stricta
Bostr.7867s1503 10.0kb upstream 10.0kb upstream 11534 true Scaffold7867: 7591082-7602615 Boechera stricta
Bostr.7867s1503 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 7592616-7602615 Boechera stricta
Bostr.7867s1503 10.0kb downstream 10.0kb downstream 11534 true Scaffold7867: 7581082-7592615 Boechera stricta
Bostr.7867s1503 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 7581082-7591081 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365719 5261 Brassicaceae View MSA
123799020 5264 Brassicales-Malvales View MSA
124296586 5266 SBM View MSA
124148693 5268 Malvidae View MSA
124074247 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain