Gene : Bostr.7867s1424 B. stricta v1.2
Defline:  (1 of 2) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  1424
Name:  ? Bostr.7867s1424 Secondary Identifier:  ? PAC:30658713
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CYSTSYN-PWY Boechera stricta pathologic  
Bstricta PWY-6936 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1424 0.5kb upstream 0.5kb upstream 2986 true Scaffold7867: 7190947-7193932 Boechera stricta
Bostr.7867s1424 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 7193433-7193932 Boechera stricta
Bostr.7867s1424 0.5kb downstream 0.5kb downstream 2986 true Scaffold7867: 7190447-7193432 Boechera stricta
Bostr.7867s1424 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 7190447-7190946 Boechera stricta
Bostr.7867s1424 1.0kb upstream 1.0kb upstream 3486 true Scaffold7867: 7190947-7194432 Boechera stricta
Bostr.7867s1424 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 7193433-7194432 Boechera stricta
Bostr.7867s1424 1.0kb downstream 1.0kb downstream 3486 true Scaffold7867: 7189947-7193432 Boechera stricta
Bostr.7867s1424 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 7189947-7190946 Boechera stricta
Bostr.7867s1424 2.0kb upstream 2.0kb upstream 4486 true Scaffold7867: 7190947-7195432 Boechera stricta
Bostr.7867s1424 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 7193433-7195432 Boechera stricta
Bostr.7867s1424 2.0kb downstream 2.0kb downstream 4486 true Scaffold7867: 7188947-7193432 Boechera stricta
Bostr.7867s1424 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 7188947-7190946 Boechera stricta
Bostr.7867s1424 5.0kb upstream 5.0kb upstream 7486 true Scaffold7867: 7190947-7198432 Boechera stricta
Bostr.7867s1424 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 7193433-7198432 Boechera stricta
Bostr.7867s1424 5.0kb downstream 5.0kb downstream 7486 true Scaffold7867: 7185947-7193432 Boechera stricta
Bostr.7867s1424 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 7185947-7190946 Boechera stricta
Bostr.7867s1424 10.0kb upstream 10.0kb upstream 12486 true Scaffold7867: 7190947-7203432 Boechera stricta
Bostr.7867s1424 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 7193433-7203432 Boechera stricta
Bostr.7867s1424 10.0kb downstream 10.0kb downstream 12486 true Scaffold7867: 7180947-7193432 Boechera stricta
Bostr.7867s1424 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 7180947-7190946 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377353 5261 Brassicaceae View MSA
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain