Gene : Bostr.7867s1344 B. stricta v1.2
Defline:  (1 of 3) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  1344
Name:  ? Bostr.7867s1344 Secondary Identifier:  ? PAC:30658295
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1344 0.5kb upstream 0.5kb upstream 2039 true Scaffold7867: 6835676-6837714 Boechera stricta
Bostr.7867s1344 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 6835676-6836175 Boechera stricta
Bostr.7867s1344 0.5kb downstream 0.5kb downstream 2039 true Scaffold7867: 6836176-6838214 Boechera stricta
Bostr.7867s1344 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 6837715-6838214 Boechera stricta
Bostr.7867s1344 1.0kb upstream 1.0kb upstream 2539 true Scaffold7867: 6835176-6837714 Boechera stricta
Bostr.7867s1344 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 6835176-6836175 Boechera stricta
Bostr.7867s1344 1.0kb downstream 1.0kb downstream 2539 true Scaffold7867: 6836176-6838714 Boechera stricta
Bostr.7867s1344 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 6837715-6838714 Boechera stricta
Bostr.7867s1344 2.0kb upstream 2.0kb upstream 3539 true Scaffold7867: 6834176-6837714 Boechera stricta
Bostr.7867s1344 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 6834176-6836175 Boechera stricta
Bostr.7867s1344 2.0kb downstream 2.0kb downstream 3539 true Scaffold7867: 6836176-6839714 Boechera stricta
Bostr.7867s1344 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 6837715-6839714 Boechera stricta
Bostr.7867s1344 5.0kb upstream 5.0kb upstream 6539 true Scaffold7867: 6831176-6837714 Boechera stricta
Bostr.7867s1344 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 6831176-6836175 Boechera stricta
Bostr.7867s1344 5.0kb downstream 5.0kb downstream 6539 true Scaffold7867: 6836176-6842714 Boechera stricta
Bostr.7867s1344 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 6837715-6842714 Boechera stricta
Bostr.7867s1344 10.0kb upstream 10.0kb upstream 11539 true Scaffold7867: 6826176-6837714 Boechera stricta
Bostr.7867s1344 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 6826176-6836175 Boechera stricta
Bostr.7867s1344 10.0kb downstream 10.0kb downstream 11539 true Scaffold7867: 6836176-6847714 Boechera stricta
Bostr.7867s1344 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 6837715-6847714 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367614 5261 Brassicaceae View MSA
123828029 5264 Brassicales-Malvales View MSA
124342299 5266 SBM View MSA
124240993 5268 Malvidae View MSA
124063959 5270 Rosid View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain