Gene : Bostr.7867s1136 B. stricta v1.2

Defline:  (1 of 2) PTHR10682:SF22 - NUCLEAR POLY(A) POLYMERASE Genomic Order:  1136
Name:  ? Bostr.7867s1136 Secondary Identifier:  ? PAC:30658309

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1136 0.5kb upstream 0.5kb upstream 5777 true Scaffold7867: 5809420-5815196 Boechera stricta
Bostr.7867s1136 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 5809420-5809919 Boechera stricta
Bostr.7867s1136 0.5kb downstream 0.5kb downstream 5777 true Scaffold7867: 5809920-5815696 Boechera stricta
Bostr.7867s1136 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 5815197-5815696 Boechera stricta
Bostr.7867s1136 1.0kb upstream 1.0kb upstream 6277 true Scaffold7867: 5808920-5815196 Boechera stricta
Bostr.7867s1136 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 5808920-5809919 Boechera stricta
Bostr.7867s1136 1.0kb downstream 1.0kb downstream 6277 true Scaffold7867: 5809920-5816196 Boechera stricta
Bostr.7867s1136 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 5815197-5816196 Boechera stricta
Bostr.7867s1136 2.0kb upstream 2.0kb upstream 7277 true Scaffold7867: 5807920-5815196 Boechera stricta
Bostr.7867s1136 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 5807920-5809919 Boechera stricta
Bostr.7867s1136 2.0kb downstream 2.0kb downstream 7277 true Scaffold7867: 5809920-5817196 Boechera stricta
Bostr.7867s1136 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 5815197-5817196 Boechera stricta
Bostr.7867s1136 5.0kb upstream 5.0kb upstream 10277 true Scaffold7867: 5804920-5815196 Boechera stricta
Bostr.7867s1136 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 5804920-5809919 Boechera stricta
Bostr.7867s1136 5.0kb downstream 5.0kb downstream 10277 true Scaffold7867: 5809920-5820196 Boechera stricta
Bostr.7867s1136 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 5815197-5820196 Boechera stricta
Bostr.7867s1136 10.0kb upstream 10.0kb upstream 15277 true Scaffold7867: 5799920-5815196 Boechera stricta
Bostr.7867s1136 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 5799920-5809919 Boechera stricta
Bostr.7867s1136 10.0kb downstream 10.0kb downstream 15277 true Scaffold7867: 5809920-5825196 Boechera stricta
Bostr.7867s1136 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 5815197-5825196 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364447 5261 Brassicaceae View MSA
123836040 5264 Brassicales-Malvales View MSA
124344947 5266 SBM View MSA
124249633 5268 Malvidae View MSA
124066442 5270 Rosid View MSA
123745238 5271 Pentapetalae View MSA
122790232 5272 Eudicot View MSA
122045017 5273 Angiosperm View MSA
123429108 5275 Viridiplantae View MSA
121348362 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain