Gene : Bostr.7867s1040 B. stricta v1.2
Defline:  (1 of 4) 1.11.1.12 - Phospholipid-hydroperoxide glutathione peroxidase / Peroxidation-inhibiting protein Genomic Order:  1040
Name:  ? Bostr.7867s1040 Secondary Identifier:  ? PAC:30658434
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-4081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1040 0.5kb upstream 0.5kb upstream 2220 true Scaffold7867: 5301181-5303400 Boechera stricta
Bostr.7867s1040 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 5301181-5301680 Boechera stricta
Bostr.7867s1040 0.5kb downstream 0.5kb downstream 2220 true Scaffold7867: 5301681-5303900 Boechera stricta
Bostr.7867s1040 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 5303401-5303900 Boechera stricta
Bostr.7867s1040 1.0kb upstream 1.0kb upstream 2720 true Scaffold7867: 5300681-5303400 Boechera stricta
Bostr.7867s1040 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 5300681-5301680 Boechera stricta
Bostr.7867s1040 1.0kb downstream 1.0kb downstream 2720 true Scaffold7867: 5301681-5304400 Boechera stricta
Bostr.7867s1040 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 5303401-5304400 Boechera stricta
Bostr.7867s1040 2.0kb upstream 2.0kb upstream 3720 true Scaffold7867: 5299681-5303400 Boechera stricta
Bostr.7867s1040 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 5299681-5301680 Boechera stricta
Bostr.7867s1040 2.0kb downstream 2.0kb downstream 3720 true Scaffold7867: 5301681-5305400 Boechera stricta
Bostr.7867s1040 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 5303401-5305400 Boechera stricta
Bostr.7867s1040 5.0kb upstream 5.0kb upstream 6720 true Scaffold7867: 5296681-5303400 Boechera stricta
Bostr.7867s1040 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 5296681-5301680 Boechera stricta
Bostr.7867s1040 5.0kb downstream 5.0kb downstream 6720 true Scaffold7867: 5301681-5308400 Boechera stricta
Bostr.7867s1040 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 5303401-5308400 Boechera stricta
Bostr.7867s1040 10.0kb upstream 10.0kb upstream 11720 true Scaffold7867: 5291681-5303400 Boechera stricta
Bostr.7867s1040 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 5291681-5301680 Boechera stricta
Bostr.7867s1040 10.0kb downstream 10.0kb downstream 11720 true Scaffold7867: 5301681-5313400 Boechera stricta
Bostr.7867s1040 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 5303401-5313400 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379433 5261 Brassicaceae View MSA
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain