Gene : Bostr.7867s1052 B. stricta v1.2
Defline:  (1 of 1) PTHR11879:SF1 - ASPARTATE AMINOTRANSFERASE, CHLOROPLASTIC Genomic Order:  1052
Name:  ? Bostr.7867s1052 Secondary Identifier:  ? PAC:30657604
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ASPARTATE-DEG1-PWY Boechera stricta pathologic  
Bstricta ASPARTATESYN-PWY Boechera stricta pathologic  
Bstricta PWY-3001 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  
Bstricta THRESYN-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1052 0.5kb upstream 0.5kb upstream 3634 true Scaffold7867: 5361905-5365538 Boechera stricta
Bostr.7867s1052 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 5365039-5365538 Boechera stricta
Bostr.7867s1052 0.5kb downstream 0.5kb downstream 3634 true Scaffold7867: 5361405-5365038 Boechera stricta
Bostr.7867s1052 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 5361405-5361904 Boechera stricta
Bostr.7867s1052 1.0kb upstream 1.0kb upstream 4134 true Scaffold7867: 5361905-5366038 Boechera stricta
Bostr.7867s1052 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 5365039-5366038 Boechera stricta
Bostr.7867s1052 1.0kb downstream 1.0kb downstream 4134 true Scaffold7867: 5360905-5365038 Boechera stricta
Bostr.7867s1052 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 5360905-5361904 Boechera stricta
Bostr.7867s1052 2.0kb upstream 2.0kb upstream 5134 true Scaffold7867: 5361905-5367038 Boechera stricta
Bostr.7867s1052 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 5365039-5367038 Boechera stricta
Bostr.7867s1052 2.0kb downstream 2.0kb downstream 5134 true Scaffold7867: 5359905-5365038 Boechera stricta
Bostr.7867s1052 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 5359905-5361904 Boechera stricta
Bostr.7867s1052 5.0kb upstream 5.0kb upstream 8134 true Scaffold7867: 5361905-5370038 Boechera stricta
Bostr.7867s1052 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 5365039-5370038 Boechera stricta
Bostr.7867s1052 5.0kb downstream 5.0kb downstream 8134 true Scaffold7867: 5356905-5365038 Boechera stricta
Bostr.7867s1052 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 5356905-5361904 Boechera stricta
Bostr.7867s1052 10.0kb upstream 10.0kb upstream 13134 true Scaffold7867: 5361905-5375038 Boechera stricta
Bostr.7867s1052 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 5365039-5375038 Boechera stricta
Bostr.7867s1052 10.0kb downstream 10.0kb downstream 13134 true Scaffold7867: 5351905-5365038 Boechera stricta
Bostr.7867s1052 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 5351905-5361904 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376883 5261 Brassicaceae View MSA
123833369 5264 Brassicales-Malvales View MSA
124341327 5266 SBM View MSA
124241276 5268 Malvidae View MSA
124066749 5270 Rosid View MSA
123740507 5271 Pentapetalae View MSA
122797537 5272 Eudicot View MSA
122048100 5273 Angiosperm View MSA
121346908 5274 Embryophyte View MSA
123424622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain