Gene : Bostr.10040s0169 B. stricta v1.2
Defline:  (1 of 2) PTHR11183:SF53 - GALACTINOL SYNTHASE 4-RELATED Genomic Order:  169
Name:  ? Bostr.10040s0169 Secondary Identifier:  ? PAC:30669938
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5337 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10040s0169 0.5kb upstream 0.5kb upstream 2855 true Scaffold10040: 1454728-1457582 Boechera stricta
Bostr.10040s0169 0.5kb upstream 0.5kb upstream 500 false Scaffold10040: 1454728-1455227 Boechera stricta
Bostr.10040s0169 0.5kb downstream 0.5kb downstream 2855 true Scaffold10040: 1455228-1458082 Boechera stricta
Bostr.10040s0169 0.5kb downstream 0.5kb downstream 500 false Scaffold10040: 1457583-1458082 Boechera stricta
Bostr.10040s0169 1.0kb upstream 1.0kb upstream 3355 true Scaffold10040: 1454228-1457582 Boechera stricta
Bostr.10040s0169 1.0kb upstream 1.0kb upstream 1000 false Scaffold10040: 1454228-1455227 Boechera stricta
Bostr.10040s0169 1.0kb downstream 1.0kb downstream 3355 true Scaffold10040: 1455228-1458582 Boechera stricta
Bostr.10040s0169 1.0kb downstream 1.0kb downstream 1000 false Scaffold10040: 1457583-1458582 Boechera stricta
Bostr.10040s0169 2.0kb upstream 2.0kb upstream 4355 true Scaffold10040: 1453228-1457582 Boechera stricta
Bostr.10040s0169 2.0kb upstream 2.0kb upstream 2000 false Scaffold10040: 1453228-1455227 Boechera stricta
Bostr.10040s0169 2.0kb downstream 2.0kb downstream 4355 true Scaffold10040: 1455228-1459582 Boechera stricta
Bostr.10040s0169 2.0kb downstream 2.0kb downstream 2000 false Scaffold10040: 1457583-1459582 Boechera stricta
Bostr.10040s0169 5.0kb upstream 5.0kb upstream 7355 true Scaffold10040: 1450228-1457582 Boechera stricta
Bostr.10040s0169 5.0kb upstream 5.0kb upstream 5000 false Scaffold10040: 1450228-1455227 Boechera stricta
Bostr.10040s0169 5.0kb downstream 5.0kb downstream 7355 true Scaffold10040: 1455228-1462582 Boechera stricta
Bostr.10040s0169 5.0kb downstream 5.0kb downstream 5000 false Scaffold10040: 1457583-1462582 Boechera stricta
Bostr.10040s0169 10.0kb upstream 10.0kb upstream 12355 true Scaffold10040: 1445228-1457582 Boechera stricta
Bostr.10040s0169 10.0kb upstream 10.0kb upstream 10000 false Scaffold10040: 1445228-1455227 Boechera stricta
Bostr.10040s0169 10.0kb downstream 10.0kb downstream 12355 true Scaffold10040: 1455228-1467582 Boechera stricta
Bostr.10040s0169 10.0kb downstream 10.0kb downstream 10000 false Scaffold10040: 1457583-1467582 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370794 5261 Brassicaceae View MSA
123829089 5264 Brassicales-Malvales View MSA
124338384 5266 SBM View MSA
124242793 5268 Malvidae View MSA
124061289 5270 Rosid View MSA
123746069 5271 Pentapetalae View MSA
122793646 5272 Eudicot View MSA
122046900 5273 Angiosperm View MSA
121310671 5274 Embryophyte View MSA
123348097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain