Gene : Bostr.7903s0143 B. stricta v1.2

Defline:  (1 of 2) PTHR34549:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED Genomic Order:  143
Name:  ? Bostr.7903s0143 Secondary Identifier:  ? PAC:30678241

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7903s0143 0.5kb upstream 0.5kb upstream 1533 true Scaffold7903: 672546-674078 Boechera stricta
Bostr.7903s0143 0.5kb upstream 0.5kb upstream 500 false Scaffold7903: 673579-674078 Boechera stricta
Bostr.7903s0143 0.5kb downstream 0.5kb downstream 1533 true Scaffold7903: 672046-673578 Boechera stricta
Bostr.7903s0143 0.5kb downstream 0.5kb downstream 500 false Scaffold7903: 672046-672545 Boechera stricta
Bostr.7903s0143 1.0kb upstream 1.0kb upstream 2033 true Scaffold7903: 672546-674578 Boechera stricta
Bostr.7903s0143 1.0kb upstream 1.0kb upstream 1000 false Scaffold7903: 673579-674578 Boechera stricta
Bostr.7903s0143 1.0kb downstream 1.0kb downstream 2033 true Scaffold7903: 671546-673578 Boechera stricta
Bostr.7903s0143 1.0kb downstream 1.0kb downstream 1000 false Scaffold7903: 671546-672545 Boechera stricta
Bostr.7903s0143 2.0kb upstream 2.0kb upstream 3033 true Scaffold7903: 672546-675578 Boechera stricta
Bostr.7903s0143 2.0kb upstream 2.0kb upstream 2000 false Scaffold7903: 673579-675578 Boechera stricta
Bostr.7903s0143 2.0kb downstream 2.0kb downstream 3033 true Scaffold7903: 670546-673578 Boechera stricta
Bostr.7903s0143 2.0kb downstream 2.0kb downstream 2000 false Scaffold7903: 670546-672545 Boechera stricta
Bostr.7903s0143 5.0kb upstream 5.0kb upstream 6033 true Scaffold7903: 672546-678578 Boechera stricta
Bostr.7903s0143 5.0kb upstream 5.0kb upstream 5000 false Scaffold7903: 673579-678578 Boechera stricta
Bostr.7903s0143 5.0kb downstream 5.0kb downstream 6033 true Scaffold7903: 667546-673578 Boechera stricta
Bostr.7903s0143 5.0kb downstream 5.0kb downstream 5000 false Scaffold7903: 667546-672545 Boechera stricta
Bostr.7903s0143 10.0kb upstream 10.0kb upstream 11033 true Scaffold7903: 672546-683578 Boechera stricta
Bostr.7903s0143 10.0kb upstream 10.0kb upstream 10000 false Scaffold7903: 673579-683578 Boechera stricta
Bostr.7903s0143 10.0kb downstream 10.0kb downstream 11033 true Scaffold7903: 662546-673578 Boechera stricta
Bostr.7903s0143 10.0kb downstream 10.0kb downstream 10000 false Scaffold7903: 662546-672545 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377467 5261 Brassicaceae View MSA
123840896 5264 Brassicales-Malvales View MSA
124339470 5266 SBM View MSA
124244630 5268 Malvidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain