Gene : Bostr.8169s0005 B. stricta v1.2
Defline:  (1 of 6) PTHR10529 - LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED Genomic Order:  5
Name:  ? Bostr.8169s0005 Secondary Identifier:  ? PAC:30654907
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.8169s0005 0.5kb upstream 0.5kb upstream 3214 true Scaffold8169: 173104-176317 Boechera stricta
Bostr.8169s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold8169: 173104-173603 Boechera stricta
Bostr.8169s0005 0.5kb downstream 0.5kb downstream 3214 true Scaffold8169: 173604-176817 Boechera stricta
Bostr.8169s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold8169: 176318-176817 Boechera stricta
Bostr.8169s0005 1.0kb upstream 1.0kb upstream 3714 true Scaffold8169: 172604-176317 Boechera stricta
Bostr.8169s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold8169: 172604-173603 Boechera stricta
Bostr.8169s0005 1.0kb downstream 1.0kb downstream 3714 true Scaffold8169: 173604-177317 Boechera stricta
Bostr.8169s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold8169: 176318-177317 Boechera stricta
Bostr.8169s0005 2.0kb upstream 2.0kb upstream 4714 true Scaffold8169: 171604-176317 Boechera stricta
Bostr.8169s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold8169: 171604-173603 Boechera stricta
Bostr.8169s0005 2.0kb downstream 2.0kb downstream 4714 true Scaffold8169: 173604-178317 Boechera stricta
Bostr.8169s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold8169: 176318-178317 Boechera stricta
Bostr.8169s0005 5.0kb upstream 5.0kb upstream 7714 true Scaffold8169: 168604-176317 Boechera stricta
Bostr.8169s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold8169: 168604-173603 Boechera stricta
Bostr.8169s0005 5.0kb downstream 5.0kb downstream 7714 true Scaffold8169: 173604-181317 Boechera stricta
Bostr.8169s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold8169: 176318-181317 Boechera stricta
Bostr.8169s0005 10.0kb upstream 10.0kb upstream 12714 true Scaffold8169: 163604-176317 Boechera stricta
Bostr.8169s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold8169: 163604-173603 Boechera stricta
Bostr.8169s0005 10.0kb downstream 10.0kb downstream 12714 true Scaffold8169: 173604-186317 Boechera stricta
Bostr.8169s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold8169: 176318-186317 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366603 5261 Brassicaceae View MSA
123834742 5264 Brassicales-Malvales View MSA
124337517 5266 SBM View MSA
124239275 5268 Malvidae View MSA
124067880 5270 Rosid View MSA
123739903 5271 Pentapetalae View MSA
122788597 5272 Eudicot View MSA
122044691 5273 Angiosperm View MSA
121345479 5274 Embryophyte View MSA
123425164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain