Gene : Bostr.7903s0047 B. stricta v1.2

Defline:  (1 of 11) PF05623 - Protein of unknown function (DUF789) (DUF789) Genomic Order:  47
Name:  ? Bostr.7903s0047 Secondary Identifier:  ? PAC:30678124

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7903s0047 0.5kb upstream 0.5kb upstream 3297 true Scaffold7903: 259144-262440 Boechera stricta
Bostr.7903s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold7903: 259144-259643 Boechera stricta
Bostr.7903s0047 0.5kb downstream 0.5kb downstream 3297 true Scaffold7903: 259644-262940 Boechera stricta
Bostr.7903s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold7903: 262441-262940 Boechera stricta
Bostr.7903s0047 1.0kb upstream 1.0kb upstream 3797 true Scaffold7903: 258644-262440 Boechera stricta
Bostr.7903s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold7903: 258644-259643 Boechera stricta
Bostr.7903s0047 1.0kb downstream 1.0kb downstream 3797 true Scaffold7903: 259644-263440 Boechera stricta
Bostr.7903s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold7903: 262441-263440 Boechera stricta
Bostr.7903s0047 2.0kb upstream 2.0kb upstream 4797 true Scaffold7903: 257644-262440 Boechera stricta
Bostr.7903s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold7903: 257644-259643 Boechera stricta
Bostr.7903s0047 2.0kb downstream 2.0kb downstream 4797 true Scaffold7903: 259644-264440 Boechera stricta
Bostr.7903s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold7903: 262441-264440 Boechera stricta
Bostr.7903s0047 5.0kb upstream 5.0kb upstream 7797 true Scaffold7903: 254644-262440 Boechera stricta
Bostr.7903s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold7903: 254644-259643 Boechera stricta
Bostr.7903s0047 5.0kb downstream 5.0kb downstream 7797 true Scaffold7903: 259644-267440 Boechera stricta
Bostr.7903s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold7903: 262441-267440 Boechera stricta
Bostr.7903s0047 10.0kb upstream 10.0kb upstream 12797 true Scaffold7903: 249644-262440 Boechera stricta
Bostr.7903s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold7903: 249644-259643 Boechera stricta
Bostr.7903s0047 10.0kb downstream 10.0kb downstream 12797 true Scaffold7903: 259644-272440 Boechera stricta
Bostr.7903s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold7903: 262441-272440 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366455 5261 Brassicaceae View MSA
123832276 5264 Brassicales-Malvales View MSA
124338427 5266 SBM View MSA
124250425 5268 Malvidae View MSA
124071445 5270 Rosid View MSA
123749810 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain