Gene : Bostr.7867s1586 B. stricta v1.2

Defline:  (1 of 2) PTHR24093:SF272 - CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  1586
Name:  ? Bostr.7867s1586 Secondary Identifier:  ? PAC:30658168

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7867s1586 0.5kb upstream 0.5kb upstream 5205 true Scaffold7867: 8019403-8024607 Boechera stricta
Bostr.7867s1586 0.5kb upstream 0.5kb upstream 500 false Scaffold7867: 8024108-8024607 Boechera stricta
Bostr.7867s1586 0.5kb downstream 0.5kb downstream 5205 true Scaffold7867: 8018903-8024107 Boechera stricta
Bostr.7867s1586 0.5kb downstream 0.5kb downstream 500 false Scaffold7867: 8018903-8019402 Boechera stricta
Bostr.7867s1586 1.0kb upstream 1.0kb upstream 5705 true Scaffold7867: 8019403-8025107 Boechera stricta
Bostr.7867s1586 1.0kb upstream 1.0kb upstream 1000 false Scaffold7867: 8024108-8025107 Boechera stricta
Bostr.7867s1586 1.0kb downstream 1.0kb downstream 5705 true Scaffold7867: 8018403-8024107 Boechera stricta
Bostr.7867s1586 1.0kb downstream 1.0kb downstream 1000 false Scaffold7867: 8018403-8019402 Boechera stricta
Bostr.7867s1586 2.0kb upstream 2.0kb upstream 6705 true Scaffold7867: 8019403-8026107 Boechera stricta
Bostr.7867s1586 2.0kb upstream 2.0kb upstream 2000 false Scaffold7867: 8024108-8026107 Boechera stricta
Bostr.7867s1586 2.0kb downstream 2.0kb downstream 6705 true Scaffold7867: 8017403-8024107 Boechera stricta
Bostr.7867s1586 2.0kb downstream 2.0kb downstream 2000 false Scaffold7867: 8017403-8019402 Boechera stricta
Bostr.7867s1586 5.0kb upstream 5.0kb upstream 9705 true Scaffold7867: 8019403-8029107 Boechera stricta
Bostr.7867s1586 5.0kb upstream 5.0kb upstream 5000 false Scaffold7867: 8024108-8029107 Boechera stricta
Bostr.7867s1586 5.0kb downstream 5.0kb downstream 9705 true Scaffold7867: 8014403-8024107 Boechera stricta
Bostr.7867s1586 5.0kb downstream 5.0kb downstream 5000 false Scaffold7867: 8014403-8019402 Boechera stricta
Bostr.7867s1586 10.0kb upstream 10.0kb upstream 14705 true Scaffold7867: 8019403-8034107 Boechera stricta
Bostr.7867s1586 10.0kb upstream 10.0kb upstream 10000 false Scaffold7867: 8024108-8034107 Boechera stricta
Bostr.7867s1586 10.0kb downstream 10.0kb downstream 14705 true Scaffold7867: 8009403-8024107 Boechera stricta
Bostr.7867s1586 10.0kb downstream 10.0kb downstream 10000 false Scaffold7867: 8009403-8019402 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364750 5261 Brassicaceae View MSA
123829447 5264 Brassicales-Malvales View MSA
124342069 5266 SBM View MSA
124244823 5268 Malvidae View MSA
124064324 5270 Rosid View MSA
123739287 5271 Pentapetalae View MSA
122793193 5272 Eudicot View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain