Gene : Bostr.10199s0103 B. stricta v1.2
Defline:  (1 of 3) 6.2.1.5 - Succinate--CoA ligase (ADP-forming) / Succinyl-CoA synthetase (ADP-forming) Genomic Order:  103
Name:  ? Bostr.10199s0103 Secondary Identifier:  ? PAC:30675804
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5464 Boechera stricta pathologic  
Bstricta PWY-5690 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10199s0103 0.5kb upstream 0.5kb upstream 2993 true Scaffold10199: 698372-701364 Boechera stricta
Bostr.10199s0103 0.5kb upstream 0.5kb upstream 500 false Scaffold10199: 698372-698871 Boechera stricta
Bostr.10199s0103 0.5kb downstream 0.5kb downstream 2993 true Scaffold10199: 698872-701864 Boechera stricta
Bostr.10199s0103 0.5kb downstream 0.5kb downstream 500 false Scaffold10199: 701365-701864 Boechera stricta
Bostr.10199s0103 1.0kb upstream 1.0kb upstream 3493 true Scaffold10199: 697872-701364 Boechera stricta
Bostr.10199s0103 1.0kb upstream 1.0kb upstream 1000 false Scaffold10199: 697872-698871 Boechera stricta
Bostr.10199s0103 1.0kb downstream 1.0kb downstream 3493 true Scaffold10199: 698872-702364 Boechera stricta
Bostr.10199s0103 1.0kb downstream 1.0kb downstream 1000 false Scaffold10199: 701365-702364 Boechera stricta
Bostr.10199s0103 2.0kb upstream 2.0kb upstream 4493 true Scaffold10199: 696872-701364 Boechera stricta
Bostr.10199s0103 2.0kb upstream 2.0kb upstream 2000 false Scaffold10199: 696872-698871 Boechera stricta
Bostr.10199s0103 2.0kb downstream 2.0kb downstream 4493 true Scaffold10199: 698872-703364 Boechera stricta
Bostr.10199s0103 2.0kb downstream 2.0kb downstream 2000 false Scaffold10199: 701365-703364 Boechera stricta
Bostr.10199s0103 5.0kb upstream 5.0kb upstream 7493 true Scaffold10199: 693872-701364 Boechera stricta
Bostr.10199s0103 5.0kb upstream 5.0kb upstream 5000 false Scaffold10199: 693872-698871 Boechera stricta
Bostr.10199s0103 5.0kb downstream 5.0kb downstream 7493 true Scaffold10199: 698872-706364 Boechera stricta
Bostr.10199s0103 5.0kb downstream 5.0kb downstream 5000 false Scaffold10199: 701365-706364 Boechera stricta
Bostr.10199s0103 10.0kb upstream 10.0kb upstream 12493 true Scaffold10199: 688872-701364 Boechera stricta
Bostr.10199s0103 10.0kb upstream 10.0kb upstream 10000 false Scaffold10199: 688872-698871 Boechera stricta
Bostr.10199s0103 10.0kb downstream 10.0kb downstream 12493 true Scaffold10199: 698872-711364 Boechera stricta
Bostr.10199s0103 10.0kb downstream 10.0kb downstream 10000 false Scaffold10199: 701365-711364 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377125 5261 Brassicaceae View MSA
123837758 5264 Brassicales-Malvales View MSA
124342253 5266 SBM View MSA
124250817 5268 Malvidae View MSA
124071271 5270 Rosid View MSA
123744798 5271 Pentapetalae View MSA
122787057 5272 Eudicot View MSA
122044805 5273 Angiosperm View MSA
121349115 5274 Embryophyte View MSA
123424705 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain