Gene : Bostr.10040s0104 B. stricta v1.2
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  104
Name:  ? Bostr.10040s0104 Secondary Identifier:  ? PAC:30669802
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYCLEAV-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10040s0104 0.5kb upstream 0.5kb upstream 3135 true Scaffold10040: 992001-995135 Boechera stricta
Bostr.10040s0104 0.5kb upstream 0.5kb upstream 500 false Scaffold10040: 992001-992500 Boechera stricta
Bostr.10040s0104 0.5kb downstream 0.5kb downstream 3135 true Scaffold10040: 992501-995635 Boechera stricta
Bostr.10040s0104 0.5kb downstream 0.5kb downstream 500 false Scaffold10040: 995136-995635 Boechera stricta
Bostr.10040s0104 1.0kb upstream 1.0kb upstream 3635 true Scaffold10040: 991501-995135 Boechera stricta
Bostr.10040s0104 1.0kb upstream 1.0kb upstream 1000 false Scaffold10040: 991501-992500 Boechera stricta
Bostr.10040s0104 1.0kb downstream 1.0kb downstream 3635 true Scaffold10040: 992501-996135 Boechera stricta
Bostr.10040s0104 1.0kb downstream 1.0kb downstream 1000 false Scaffold10040: 995136-996135 Boechera stricta
Bostr.10040s0104 2.0kb upstream 2.0kb upstream 4635 true Scaffold10040: 990501-995135 Boechera stricta
Bostr.10040s0104 2.0kb upstream 2.0kb upstream 2000 false Scaffold10040: 990501-992500 Boechera stricta
Bostr.10040s0104 2.0kb downstream 2.0kb downstream 4635 true Scaffold10040: 992501-997135 Boechera stricta
Bostr.10040s0104 2.0kb downstream 2.0kb downstream 2000 false Scaffold10040: 995136-997135 Boechera stricta
Bostr.10040s0104 5.0kb upstream 5.0kb upstream 7635 true Scaffold10040: 987501-995135 Boechera stricta
Bostr.10040s0104 5.0kb upstream 5.0kb upstream 5000 false Scaffold10040: 987501-992500 Boechera stricta
Bostr.10040s0104 5.0kb downstream 5.0kb downstream 7635 true Scaffold10040: 992501-1000135 Boechera stricta
Bostr.10040s0104 5.0kb downstream 5.0kb downstream 5000 false Scaffold10040: 995136-1000135 Boechera stricta
Bostr.10040s0104 10.0kb upstream 10.0kb upstream 12635 true Scaffold10040: 982501-995135 Boechera stricta
Bostr.10040s0104 10.0kb upstream 10.0kb upstream 10000 false Scaffold10040: 982501-992500 Boechera stricta
Bostr.10040s0104 10.0kb downstream 10.0kb downstream 12635 true Scaffold10040: 992501-1005135 Boechera stricta
Bostr.10040s0104 10.0kb downstream 10.0kb downstream 10000 false Scaffold10040: 995136-1005135 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367907 5261 Brassicaceae View MSA
123829010 5264 Brassicales-Malvales View MSA
124339794 5266 SBM View MSA
124244031 5268 Malvidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain