Gene : Bostr.10040s0127 B. stricta v1.2

Defline:  (1 of 1) PF00169//PF01412//PF12796//PF16746 - PH domain (PH) // Putative GTPase activating protein for Arf (ArfGap) // Ankyrin repeats (3 copies) (Ank_2) // BAR domain of APPL family (BAR_3) Genomic Order:  127
Name:  ? Bostr.10040s0127 Secondary Identifier:  ? PAC:30669800

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10040s0127 0.5kb upstream 0.5kb upstream 7710 true Scaffold10040: 1109453-1117162 Boechera stricta
Bostr.10040s0127 0.5kb upstream 0.5kb upstream 500 false Scaffold10040: 1109453-1109952 Boechera stricta
Bostr.10040s0127 0.5kb downstream 0.5kb downstream 7710 true Scaffold10040: 1109953-1117662 Boechera stricta
Bostr.10040s0127 0.5kb downstream 0.5kb downstream 500 false Scaffold10040: 1117163-1117662 Boechera stricta
Bostr.10040s0127 1.0kb upstream 1.0kb upstream 8210 true Scaffold10040: 1108953-1117162 Boechera stricta
Bostr.10040s0127 1.0kb upstream 1.0kb upstream 1000 false Scaffold10040: 1108953-1109952 Boechera stricta
Bostr.10040s0127 1.0kb downstream 1.0kb downstream 8210 true Scaffold10040: 1109953-1118162 Boechera stricta
Bostr.10040s0127 1.0kb downstream 1.0kb downstream 1000 false Scaffold10040: 1117163-1118162 Boechera stricta
Bostr.10040s0127 2.0kb upstream 2.0kb upstream 9210 true Scaffold10040: 1107953-1117162 Boechera stricta
Bostr.10040s0127 2.0kb upstream 2.0kb upstream 2000 false Scaffold10040: 1107953-1109952 Boechera stricta
Bostr.10040s0127 2.0kb downstream 2.0kb downstream 9210 true Scaffold10040: 1109953-1119162 Boechera stricta
Bostr.10040s0127 2.0kb downstream 2.0kb downstream 2000 false Scaffold10040: 1117163-1119162 Boechera stricta
Bostr.10040s0127 5.0kb upstream 5.0kb upstream 12210 true Scaffold10040: 1104953-1117162 Boechera stricta
Bostr.10040s0127 5.0kb upstream 5.0kb upstream 5000 false Scaffold10040: 1104953-1109952 Boechera stricta
Bostr.10040s0127 5.0kb downstream 5.0kb downstream 12210 true Scaffold10040: 1109953-1122162 Boechera stricta
Bostr.10040s0127 5.0kb downstream 5.0kb downstream 5000 false Scaffold10040: 1117163-1122162 Boechera stricta
Bostr.10040s0127 10.0kb upstream 10.0kb upstream 17210 true Scaffold10040: 1099953-1117162 Boechera stricta
Bostr.10040s0127 10.0kb upstream 10.0kb upstream 10000 false Scaffold10040: 1099953-1109952 Boechera stricta
Bostr.10040s0127 10.0kb downstream 10.0kb downstream 17210 true Scaffold10040: 1109953-1127162 Boechera stricta
Bostr.10040s0127 10.0kb downstream 10.0kb downstream 10000 false Scaffold10040: 1117163-1127162 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371536 5261 Brassicaceae View MSA
123835398 5264 Brassicales-Malvales View MSA
124337869 5266 SBM View MSA
124244026 5268 Malvidae View MSA
124067763 5270 Rosid View MSA
123739571 5271 Pentapetalae View MSA
122793385 5272 Eudicot View MSA
122046098 5273 Angiosperm View MSA
121310554 5274 Embryophyte View MSA
123428285 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain