Gene : Bostr.12302s0076 B. stricta v1.2
Defline:  (1 of 2) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  76
Name:  ? Bostr.12302s0076 Secondary Identifier:  ? PAC:30664430
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-2724 Boechera stricta pathologic  
Bstricta PWY-6054 Boechera stricta pathologic  
Bstricta PWY66-21 Boechera stricta pathologic  
Bstricta PWY66-389 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12302s0076 0.5kb upstream 0.5kb upstream 4813 true Scaffold12302: 1281890-1286702 Boechera stricta
Bostr.12302s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold12302: 1286203-1286702 Boechera stricta
Bostr.12302s0076 0.5kb downstream 0.5kb downstream 4813 true Scaffold12302: 1281390-1286202 Boechera stricta
Bostr.12302s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold12302: 1281390-1281889 Boechera stricta
Bostr.12302s0076 1.0kb upstream 1.0kb upstream 5313 true Scaffold12302: 1281890-1287202 Boechera stricta
Bostr.12302s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold12302: 1286203-1287202 Boechera stricta
Bostr.12302s0076 1.0kb downstream 1.0kb downstream 5313 true Scaffold12302: 1280890-1286202 Boechera stricta
Bostr.12302s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold12302: 1280890-1281889 Boechera stricta
Bostr.12302s0076 2.0kb upstream 2.0kb upstream 6313 true Scaffold12302: 1281890-1288202 Boechera stricta
Bostr.12302s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold12302: 1286203-1288202 Boechera stricta
Bostr.12302s0076 2.0kb downstream 2.0kb downstream 6313 true Scaffold12302: 1279890-1286202 Boechera stricta
Bostr.12302s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold12302: 1279890-1281889 Boechera stricta
Bostr.12302s0076 5.0kb upstream 5.0kb upstream 9313 true Scaffold12302: 1281890-1291202 Boechera stricta
Bostr.12302s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold12302: 1286203-1291202 Boechera stricta
Bostr.12302s0076 5.0kb downstream 5.0kb downstream 9313 true Scaffold12302: 1276890-1286202 Boechera stricta
Bostr.12302s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold12302: 1276890-1281889 Boechera stricta
Bostr.12302s0076 10.0kb upstream 10.0kb upstream 14313 true Scaffold12302: 1281890-1296202 Boechera stricta
Bostr.12302s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold12302: 1286203-1296202 Boechera stricta
Bostr.12302s0076 10.0kb downstream 10.0kb downstream 14313 true Scaffold12302: 1271890-1286202 Boechera stricta
Bostr.12302s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold12302: 1271890-1281889 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363292 5261 Brassicaceae View MSA
123836527 5264 Brassicales-Malvales View MSA
124343189 5266 SBM View MSA
124240388 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain