Gene : Bostr.12302s0083 B. stricta v1.2
Defline:  (1 of 1) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  83
Name:  ? Bostr.12302s0083 Secondary Identifier:  ? PAC:30664444
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5068 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12302s0083 0.5kb upstream 0.5kb upstream 3527 true Scaffold12302: 1390143-1393669 Boechera stricta
Bostr.12302s0083 0.5kb upstream 0.5kb upstream 500 false Scaffold12302: 1393170-1393669 Boechera stricta
Bostr.12302s0083 0.5kb downstream 0.5kb downstream 3527 true Scaffold12302: 1389643-1393169 Boechera stricta
Bostr.12302s0083 0.5kb downstream 0.5kb downstream 500 false Scaffold12302: 1389643-1390142 Boechera stricta
Bostr.12302s0083 1.0kb upstream 1.0kb upstream 4027 true Scaffold12302: 1390143-1394169 Boechera stricta
Bostr.12302s0083 1.0kb upstream 1.0kb upstream 1000 false Scaffold12302: 1393170-1394169 Boechera stricta
Bostr.12302s0083 1.0kb downstream 1.0kb downstream 4027 true Scaffold12302: 1389143-1393169 Boechera stricta
Bostr.12302s0083 1.0kb downstream 1.0kb downstream 1000 false Scaffold12302: 1389143-1390142 Boechera stricta
Bostr.12302s0083 2.0kb upstream 2.0kb upstream 5027 true Scaffold12302: 1390143-1395169 Boechera stricta
Bostr.12302s0083 2.0kb upstream 2.0kb upstream 2000 false Scaffold12302: 1393170-1395169 Boechera stricta
Bostr.12302s0083 2.0kb downstream 2.0kb downstream 5027 true Scaffold12302: 1388143-1393169 Boechera stricta
Bostr.12302s0083 2.0kb downstream 2.0kb downstream 2000 false Scaffold12302: 1388143-1390142 Boechera stricta
Bostr.12302s0083 5.0kb upstream 5.0kb upstream 8027 true Scaffold12302: 1390143-1398169 Boechera stricta
Bostr.12302s0083 5.0kb upstream 5.0kb upstream 5000 false Scaffold12302: 1393170-1398169 Boechera stricta
Bostr.12302s0083 5.0kb downstream 5.0kb downstream 8027 true Scaffold12302: 1385143-1393169 Boechera stricta
Bostr.12302s0083 5.0kb downstream 5.0kb downstream 5000 false Scaffold12302: 1385143-1390142 Boechera stricta
Bostr.12302s0083 10.0kb upstream 10.0kb upstream 13027 true Scaffold12302: 1390143-1403169 Boechera stricta
Bostr.12302s0083 10.0kb upstream 10.0kb upstream 10000 false Scaffold12302: 1393170-1403169 Boechera stricta
Bostr.12302s0083 10.0kb downstream 10.0kb downstream 13027 true Scaffold12302: 1380143-1393169 Boechera stricta
Bostr.12302s0083 10.0kb downstream 10.0kb downstream 10000 false Scaffold12302: 1380143-1390142 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361363 5261 Brassicaceae View MSA
123838199 5264 Brassicales-Malvales View MSA
124342247 5266 SBM View MSA
124242720 5268 Malvidae View MSA
124067782 5270 Rosid View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain