Gene : Bostr.12302s0080 B. stricta v1.2
Defline:  (1 of 2) 4.2.1.24 - Porphobilinogen synthase / Delta-aminolevulinic acid dehydratase Genomic Order:  80
Name:  ? Bostr.12302s0080 Secondary Identifier:  ? PAC:30664374
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5188 Boechera stricta pathologic  
Bstricta PWY-5918 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12302s0080 0.5kb upstream 0.5kb upstream 2848 true Scaffold12302: 1365654-1368501 Boechera stricta
Bostr.12302s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold12302: 1365654-1366153 Boechera stricta
Bostr.12302s0080 0.5kb downstream 0.5kb downstream 2848 true Scaffold12302: 1366154-1369001 Boechera stricta
Bostr.12302s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold12302: 1368502-1369001 Boechera stricta
Bostr.12302s0080 1.0kb upstream 1.0kb upstream 3348 true Scaffold12302: 1365154-1368501 Boechera stricta
Bostr.12302s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold12302: 1365154-1366153 Boechera stricta
Bostr.12302s0080 1.0kb downstream 1.0kb downstream 3348 true Scaffold12302: 1366154-1369501 Boechera stricta
Bostr.12302s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold12302: 1368502-1369501 Boechera stricta
Bostr.12302s0080 2.0kb upstream 2.0kb upstream 4348 true Scaffold12302: 1364154-1368501 Boechera stricta
Bostr.12302s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold12302: 1364154-1366153 Boechera stricta
Bostr.12302s0080 2.0kb downstream 2.0kb downstream 4348 true Scaffold12302: 1366154-1370501 Boechera stricta
Bostr.12302s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold12302: 1368502-1370501 Boechera stricta
Bostr.12302s0080 5.0kb upstream 5.0kb upstream 7348 true Scaffold12302: 1361154-1368501 Boechera stricta
Bostr.12302s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold12302: 1361154-1366153 Boechera stricta
Bostr.12302s0080 5.0kb downstream 5.0kb downstream 7348 true Scaffold12302: 1366154-1373501 Boechera stricta
Bostr.12302s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold12302: 1368502-1373501 Boechera stricta
Bostr.12302s0080 10.0kb upstream 10.0kb upstream 12348 true Scaffold12302: 1356154-1368501 Boechera stricta
Bostr.12302s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold12302: 1356154-1366153 Boechera stricta
Bostr.12302s0080 10.0kb downstream 10.0kb downstream 12348 true Scaffold12302: 1366154-1378501 Boechera stricta
Bostr.12302s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold12302: 1368502-1378501 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510346 5273 Angiosperm View MSA
122362445 5261 Brassicaceae View MSA
123798367 5264 Brassicales-Malvales View MSA
124296012 5266 SBM View MSA
124148292 5268 Malvidae View MSA
123874315 5270 Rosid View MSA
123458308 5271 Pentapetalae View MSA
122493714 5272 Eudicot View MSA
120783448 5274 Embryophyte View MSA
122825458 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain