Gene : Bostr.12302s0096 B. stricta v1.2
Defline:  (1 of 1) PTHR31423:SF3 - PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  96
Name:  ? Bostr.12302s0096 Secondary Identifier:  ? PAC:30664485
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta TRNA-CHARGING-PWY Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12302s0096 0.5kb upstream 0.5kb upstream 2606 true Scaffold12302: 1500926-1503531 Boechera stricta
Bostr.12302s0096 0.5kb upstream 0.5kb upstream 500 false Scaffold12302: 1500926-1501425 Boechera stricta
Bostr.12302s0096 0.5kb downstream 0.5kb downstream 2606 true Scaffold12302: 1501426-1504031 Boechera stricta
Bostr.12302s0096 0.5kb downstream 0.5kb downstream 500 false Scaffold12302: 1503532-1504031 Boechera stricta
Bostr.12302s0096 1.0kb upstream 1.0kb upstream 3106 true Scaffold12302: 1500426-1503531 Boechera stricta
Bostr.12302s0096 1.0kb upstream 1.0kb upstream 1000 false Scaffold12302: 1500426-1501425 Boechera stricta
Bostr.12302s0096 1.0kb downstream 1.0kb downstream 3106 true Scaffold12302: 1501426-1504531 Boechera stricta
Bostr.12302s0096 1.0kb downstream 1.0kb downstream 1000 false Scaffold12302: 1503532-1504531 Boechera stricta
Bostr.12302s0096 2.0kb upstream 2.0kb upstream 4106 true Scaffold12302: 1499426-1503531 Boechera stricta
Bostr.12302s0096 2.0kb upstream 2.0kb upstream 2000 false Scaffold12302: 1499426-1501425 Boechera stricta
Bostr.12302s0096 2.0kb downstream 2.0kb downstream 4106 true Scaffold12302: 1501426-1505531 Boechera stricta
Bostr.12302s0096 2.0kb downstream 2.0kb downstream 2000 false Scaffold12302: 1503532-1505531 Boechera stricta
Bostr.12302s0096 5.0kb upstream 5.0kb upstream 7106 true Scaffold12302: 1496426-1503531 Boechera stricta
Bostr.12302s0096 5.0kb upstream 5.0kb upstream 5000 false Scaffold12302: 1496426-1501425 Boechera stricta
Bostr.12302s0096 5.0kb downstream 5.0kb downstream 7106 true Scaffold12302: 1501426-1508531 Boechera stricta
Bostr.12302s0096 5.0kb downstream 5.0kb downstream 5000 false Scaffold12302: 1503532-1508531 Boechera stricta
Bostr.12302s0096 10.0kb upstream 10.0kb upstream 12106 true Scaffold12302: 1491426-1503531 Boechera stricta
Bostr.12302s0096 10.0kb upstream 10.0kb upstream 10000 false Scaffold12302: 1491426-1501425 Boechera stricta
Bostr.12302s0096 10.0kb downstream 10.0kb downstream 12106 true Scaffold12302: 1501426-1513531 Boechera stricta
Bostr.12302s0096 10.0kb downstream 10.0kb downstream 10000 false Scaffold12302: 1503532-1513531 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367335 5261 Brassicaceae View MSA
123836180 5264 Brassicales-Malvales View MSA
124337596 5266 SBM View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain