Gene : Bostr.11793s0081 B. stricta v1.2
Defline:  (1 of 9) PTHR11254 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE Genomic Order:  81
Name:  ? Bostr.11793s0081 Secondary Identifier:  ? PAC:30678954
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7511 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.11793s0081 0.5kb upstream 0.5kb upstream 6054 true Scaffold11793: 400064-406117 Boechera stricta
Bostr.11793s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold11793: 405618-406117 Boechera stricta
Bostr.11793s0081 0.5kb downstream 0.5kb downstream 6054 true Scaffold11793: 399564-405617 Boechera stricta
Bostr.11793s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold11793: 399564-400063 Boechera stricta
Bostr.11793s0081 1.0kb upstream 1.0kb upstream 6554 true Scaffold11793: 400064-406617 Boechera stricta
Bostr.11793s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold11793: 405618-406617 Boechera stricta
Bostr.11793s0081 1.0kb downstream 1.0kb downstream 6554 true Scaffold11793: 399064-405617 Boechera stricta
Bostr.11793s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold11793: 399064-400063 Boechera stricta
Bostr.11793s0081 2.0kb upstream 2.0kb upstream 7554 true Scaffold11793: 400064-407617 Boechera stricta
Bostr.11793s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold11793: 405618-407617 Boechera stricta
Bostr.11793s0081 2.0kb downstream 2.0kb downstream 7554 true Scaffold11793: 398064-405617 Boechera stricta
Bostr.11793s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold11793: 398064-400063 Boechera stricta
Bostr.11793s0081 5.0kb upstream 5.0kb upstream 10554 true Scaffold11793: 400064-410617 Boechera stricta
Bostr.11793s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold11793: 405618-410617 Boechera stricta
Bostr.11793s0081 5.0kb downstream 5.0kb downstream 10554 true Scaffold11793: 395064-405617 Boechera stricta
Bostr.11793s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold11793: 395064-400063 Boechera stricta
Bostr.11793s0081 10.0kb upstream 10.0kb upstream 15554 true Scaffold11793: 400064-415617 Boechera stricta
Bostr.11793s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold11793: 405618-415617 Boechera stricta
Bostr.11793s0081 10.0kb downstream 10.0kb downstream 15554 true Scaffold11793: 390064-405617 Boechera stricta
Bostr.11793s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold11793: 390064-400063 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367039 5261 Brassicaceae View MSA
123827587 5264 Brassicales-Malvales View MSA
124346572 5266 SBM View MSA
124252639 5268 Malvidae View MSA
124065760 5270 Rosid View MSA
123737097 5271 Pentapetalae View MSA
122793139 5272 Eudicot View MSA
122047566 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121351552 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain