Gene : Bostr.12550s0001 B. stricta v1.2

Defline:  (1 of 2) PTHR13989:SF20 - REPLICATION PROTEIN A 32 KDA SUBUNIT B Genomic Order:  1
Name:  ? Bostr.12550s0001 Secondary Identifier:  ? PAC:30675316

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12550s0001 0.5kb upstream 0.5kb upstream 2691 true Scaffold12550: 390-3080 Boechera stricta
Bostr.12550s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12550: 390-889 Boechera stricta
Bostr.12550s0001 0.5kb downstream 0.5kb downstream 2691 true Scaffold12550: 890-3580 Boechera stricta
Bostr.12550s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12550: 3081-3580 Boechera stricta
Bostr.12550s0001 1.0kb upstream 1.0kb upstream 3080 true Scaffold12550: 1-3080 Boechera stricta
Bostr.12550s0001 1.0kb upstream 1.0kb upstream 889 false Scaffold12550: 1-889 Boechera stricta
Bostr.12550s0001 1.0kb downstream 1.0kb downstream 3191 true Scaffold12550: 890-4080 Boechera stricta
Bostr.12550s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold12550: 3081-4080 Boechera stricta
Bostr.12550s0001 2.0kb upstream 2.0kb upstream 3080 true Scaffold12550: 1-3080 Boechera stricta
Bostr.12550s0001 2.0kb upstream 2.0kb upstream 889 false Scaffold12550: 1-889 Boechera stricta
Bostr.12550s0001 2.0kb downstream 2.0kb downstream 3553 true Scaffold12550: 890-4442 Boechera stricta
Bostr.12550s0001 2.0kb downstream 2.0kb downstream 1362 false Scaffold12550: 3081-4442 Boechera stricta
Bostr.12550s0001 5.0kb upstream 5.0kb upstream 3080 true Scaffold12550: 1-3080 Boechera stricta
Bostr.12550s0001 5.0kb upstream 5.0kb upstream 889 false Scaffold12550: 1-889 Boechera stricta
Bostr.12550s0001 5.0kb downstream 5.0kb downstream 3553 true Scaffold12550: 890-4442 Boechera stricta
Bostr.12550s0001 5.0kb downstream 5.0kb downstream 1362 false Scaffold12550: 3081-4442 Boechera stricta
Bostr.12550s0001 10.0kb upstream 10.0kb upstream 3080 true Scaffold12550: 1-3080 Boechera stricta
Bostr.12550s0001 10.0kb upstream 10.0kb upstream 889 false Scaffold12550: 1-889 Boechera stricta
Bostr.12550s0001 10.0kb downstream 10.0kb downstream 3553 true Scaffold12550: 890-4442 Boechera stricta
Bostr.12550s0001 10.0kb downstream 10.0kb downstream 1362 false Scaffold12550: 3081-4442 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367807 5261 Brassicaceae View MSA
123836224 5264 Brassicales-Malvales View MSA
124346605 5266 SBM View MSA
124238907 5268 Malvidae View MSA
124063788 5270 Rosid View MSA
123740037 5271 Pentapetalae View MSA
122788776 5272 Eudicot View MSA
122049363 5273 Angiosperm View MSA
121347176 5274 Embryophyte View MSA
123425085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain