Gene : Bostr.11774s0002 B. stricta v1.2
Defline:  (1 of 2) PTHR13914 - PROLINE OXIDASE Genomic Order:  2
Name:  ? Bostr.11774s0002 Secondary Identifier:  ? PAC:30666292
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CITRULBIO-PWY Boechera stricta pathologic  
Bstricta PROUT-PWY Boechera stricta pathologic  
Bstricta PWY-6922 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.11774s0002 0.5kb upstream 0.5kb upstream 3519 true Scaffold11774: 56804-60322 Boechera stricta
Bostr.11774s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold11774: 56804-57303 Boechera stricta
Bostr.11774s0002 0.5kb downstream 0.5kb downstream 3519 true Scaffold11774: 57304-60822 Boechera stricta
Bostr.11774s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold11774: 60323-60822 Boechera stricta
Bostr.11774s0002 1.0kb upstream 1.0kb upstream 4019 true Scaffold11774: 56304-60322 Boechera stricta
Bostr.11774s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold11774: 56304-57303 Boechera stricta
Bostr.11774s0002 1.0kb downstream 1.0kb downstream 4019 true Scaffold11774: 57304-61322 Boechera stricta
Bostr.11774s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold11774: 60323-61322 Boechera stricta
Bostr.11774s0002 2.0kb upstream 2.0kb upstream 5019 true Scaffold11774: 55304-60322 Boechera stricta
Bostr.11774s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold11774: 55304-57303 Boechera stricta
Bostr.11774s0002 2.0kb downstream 2.0kb downstream 5019 true Scaffold11774: 57304-62322 Boechera stricta
Bostr.11774s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold11774: 60323-62322 Boechera stricta
Bostr.11774s0002 5.0kb upstream 5.0kb upstream 8019 true Scaffold11774: 52304-60322 Boechera stricta
Bostr.11774s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold11774: 52304-57303 Boechera stricta
Bostr.11774s0002 5.0kb downstream 5.0kb downstream 8019 true Scaffold11774: 57304-65322 Boechera stricta
Bostr.11774s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold11774: 60323-65322 Boechera stricta
Bostr.11774s0002 10.0kb upstream 10.0kb upstream 13019 true Scaffold11774: 47304-60322 Boechera stricta
Bostr.11774s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold11774: 47304-57303 Boechera stricta
Bostr.11774s0002 10.0kb downstream 10.0kb downstream 13019 true Scaffold11774: 57304-70322 Boechera stricta
Bostr.11774s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold11774: 60323-70322 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366292 5261 Brassicaceae View MSA
123839513 5264 Brassicales-Malvales View MSA
124339055 5266 SBM View MSA
124243556 5268 Malvidae View MSA
124068346 5270 Rosid View MSA
123743697 5271 Pentapetalae View MSA
122792525 5272 Eudicot View MSA
122047709 5273 Angiosperm View MSA
121345691 5274 Embryophyte View MSA
123427745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain