Gene : Bostr.11793s0003 B. stricta v1.2
Defline:  (1 of 1) PTHR10285:SF77 - URACIL PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  3
Name:  ? Bostr.11793s0003 Secondary Identifier:  ? PAC:30679063
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7183 Boechera stricta pathologic  
Bstricta PWY-7196 Boechera stricta pathologic  
Bstricta PWY-7208 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.11793s0003 0.5kb upstream 0.5kb upstream 3093 true Scaffold11793: 39834-42926 Boechera stricta
Bostr.11793s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold11793: 39834-40333 Boechera stricta
Bostr.11793s0003 0.5kb downstream 0.5kb downstream 3093 true Scaffold11793: 40334-43426 Boechera stricta
Bostr.11793s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold11793: 42927-43426 Boechera stricta
Bostr.11793s0003 1.0kb upstream 1.0kb upstream 3593 true Scaffold11793: 39334-42926 Boechera stricta
Bostr.11793s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold11793: 39334-40333 Boechera stricta
Bostr.11793s0003 1.0kb downstream 1.0kb downstream 3593 true Scaffold11793: 40334-43926 Boechera stricta
Bostr.11793s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold11793: 42927-43926 Boechera stricta
Bostr.11793s0003 2.0kb upstream 2.0kb upstream 4593 true Scaffold11793: 38334-42926 Boechera stricta
Bostr.11793s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold11793: 38334-40333 Boechera stricta
Bostr.11793s0003 2.0kb downstream 2.0kb downstream 4593 true Scaffold11793: 40334-44926 Boechera stricta
Bostr.11793s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold11793: 42927-44926 Boechera stricta
Bostr.11793s0003 5.0kb upstream 5.0kb upstream 7593 true Scaffold11793: 35334-42926 Boechera stricta
Bostr.11793s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold11793: 35334-40333 Boechera stricta
Bostr.11793s0003 5.0kb downstream 5.0kb downstream 7593 true Scaffold11793: 40334-47926 Boechera stricta
Bostr.11793s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold11793: 42927-47926 Boechera stricta
Bostr.11793s0003 10.0kb upstream 10.0kb upstream 12593 true Scaffold11793: 30334-42926 Boechera stricta
Bostr.11793s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold11793: 30334-40333 Boechera stricta
Bostr.11793s0003 10.0kb downstream 10.0kb downstream 12593 true Scaffold11793: 40334-52926 Boechera stricta
Bostr.11793s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold11793: 42927-52926 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374588 5261 Brassicaceae View MSA
123841692 5264 Brassicales-Malvales View MSA
124343973 5266 SBM View MSA
124246802 5268 Malvidae View MSA
124068502 5270 Rosid View MSA
123740781 5271 Pentapetalae View MSA
122786054 5272 Eudicot View MSA
122047935 5273 Angiosperm View MSA
121345361 5274 Embryophyte View MSA
123424478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain