Gene : Bostr.11793s0036 B. stricta v1.2
Defline:  (1 of 1) PTHR31689:SF0 - DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC Genomic Order:  36
Name:  ? Bostr.11793s0036 Secondary Identifier:  ? PAC:30679065
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5097 Boechera stricta pathologic  
Bstricta PWY-724 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.11793s0036 0.5kb upstream 0.5kb upstream 3104 true Scaffold11793: 161978-165081 Boechera stricta
Bostr.11793s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold11793: 164582-165081 Boechera stricta
Bostr.11793s0036 0.5kb downstream 0.5kb downstream 3104 true Scaffold11793: 161478-164581 Boechera stricta
Bostr.11793s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold11793: 161478-161977 Boechera stricta
Bostr.11793s0036 1.0kb upstream 1.0kb upstream 3604 true Scaffold11793: 161978-165581 Boechera stricta
Bostr.11793s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold11793: 164582-165581 Boechera stricta
Bostr.11793s0036 1.0kb downstream 1.0kb downstream 3604 true Scaffold11793: 160978-164581 Boechera stricta
Bostr.11793s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold11793: 160978-161977 Boechera stricta
Bostr.11793s0036 2.0kb upstream 2.0kb upstream 4604 true Scaffold11793: 161978-166581 Boechera stricta
Bostr.11793s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold11793: 164582-166581 Boechera stricta
Bostr.11793s0036 2.0kb downstream 2.0kb downstream 4604 true Scaffold11793: 159978-164581 Boechera stricta
Bostr.11793s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold11793: 159978-161977 Boechera stricta
Bostr.11793s0036 5.0kb upstream 5.0kb upstream 7604 true Scaffold11793: 161978-169581 Boechera stricta
Bostr.11793s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold11793: 164582-169581 Boechera stricta
Bostr.11793s0036 5.0kb downstream 5.0kb downstream 7604 true Scaffold11793: 156978-164581 Boechera stricta
Bostr.11793s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold11793: 156978-161977 Boechera stricta
Bostr.11793s0036 10.0kb upstream 10.0kb upstream 12604 true Scaffold11793: 161978-174581 Boechera stricta
Bostr.11793s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold11793: 164582-174581 Boechera stricta
Bostr.11793s0036 10.0kb downstream 10.0kb downstream 12604 true Scaffold11793: 151978-164581 Boechera stricta
Bostr.11793s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold11793: 151978-161977 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373276 5261 Brassicaceae View MSA
123838616 5264 Brassicales-Malvales View MSA
124341400 5266 SBM View MSA
124243364 5268 Malvidae View MSA
124061653 5270 Rosid View MSA
123740208 5271 Pentapetalae View MSA
122785704 5272 Eudicot View MSA
122047257 5273 Angiosperm View MSA
121347599 5274 Embryophyte View MSA
123423863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain