Gene : Bostr.11568s0016 B. stricta v1.2
Defline:  (1 of 3) PTHR20961//PTHR20961:SF12 - GLYCOSYLTRANSFERASE Genomic Order:  16
Name:  ? Bostr.11568s0016 Secondary Identifier:  ? PAC:30673340
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-7437 Boechera stricta pathologic  

Genomics

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Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.11568s0016 0.5kb upstream 0.5kb upstream 2532 true Scaffold11568: 153958-156489 Boechera stricta
Bostr.11568s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold11568: 155990-156489 Boechera stricta
Bostr.11568s0016 0.5kb downstream 0.5kb downstream 2532 true Scaffold11568: 153458-155989 Boechera stricta
Bostr.11568s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold11568: 153458-153957 Boechera stricta
Bostr.11568s0016 1.0kb upstream 1.0kb upstream 3032 true Scaffold11568: 153958-156989 Boechera stricta
Bostr.11568s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold11568: 155990-156989 Boechera stricta
Bostr.11568s0016 1.0kb downstream 1.0kb downstream 3032 true Scaffold11568: 152958-155989 Boechera stricta
Bostr.11568s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold11568: 152958-153957 Boechera stricta
Bostr.11568s0016 2.0kb upstream 2.0kb upstream 4032 true Scaffold11568: 153958-157989 Boechera stricta
Bostr.11568s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold11568: 155990-157989 Boechera stricta
Bostr.11568s0016 2.0kb downstream 2.0kb downstream 4032 true Scaffold11568: 151958-155989 Boechera stricta
Bostr.11568s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold11568: 151958-153957 Boechera stricta
Bostr.11568s0016 5.0kb upstream 5.0kb upstream 7032 true Scaffold11568: 153958-160989 Boechera stricta
Bostr.11568s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold11568: 155990-160989 Boechera stricta
Bostr.11568s0016 5.0kb downstream 5.0kb downstream 7032 true Scaffold11568: 148958-155989 Boechera stricta
Bostr.11568s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold11568: 148958-153957 Boechera stricta
Bostr.11568s0016 10.0kb upstream 10.0kb upstream 12032 true Scaffold11568: 153958-165989 Boechera stricta
Bostr.11568s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold11568: 155990-165989 Boechera stricta
Bostr.11568s0016 10.0kb downstream 10.0kb downstream 12032 true Scaffold11568: 143958-155989 Boechera stricta
Bostr.11568s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold11568: 143958-153957 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363446 5261 Brassicaceae View MSA
123841699 5264 Brassicales-Malvales View MSA
124338762 5266 SBM View MSA
124241039 5268 Malvidae View MSA
124063693 5270 Rosid View MSA
123741846 5271 Pentapetalae View MSA
122786725 5272 Eudicot View MSA
122048964 5273 Angiosperm View MSA
121351210 5274 Embryophyte View MSA
123382054 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain