Gene : Bostr.10689s0045 B. stricta v1.2
Defline:  (1 of 6) PTHR22981 - 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED Genomic Order:  45
Name:  ? Bostr.10689s0045 Secondary Identifier:  ? PAC:30674657
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta VALDEG-PWY Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10689s0045 0.5kb upstream 0.5kb upstream 3677 true Scaffold10689: 268394-272070 Boechera stricta
Bostr.10689s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold10689: 271571-272070 Boechera stricta
Bostr.10689s0045 0.5kb downstream 0.5kb downstream 3677 true Scaffold10689: 267894-271570 Boechera stricta
Bostr.10689s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold10689: 267894-268393 Boechera stricta
Bostr.10689s0045 1.0kb upstream 1.0kb upstream 4177 true Scaffold10689: 268394-272570 Boechera stricta
Bostr.10689s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold10689: 271571-272570 Boechera stricta
Bostr.10689s0045 1.0kb downstream 1.0kb downstream 4177 true Scaffold10689: 267394-271570 Boechera stricta
Bostr.10689s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold10689: 267394-268393 Boechera stricta
Bostr.10689s0045 2.0kb upstream 2.0kb upstream 5177 true Scaffold10689: 268394-273570 Boechera stricta
Bostr.10689s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold10689: 271571-273570 Boechera stricta
Bostr.10689s0045 2.0kb downstream 2.0kb downstream 5177 true Scaffold10689: 266394-271570 Boechera stricta
Bostr.10689s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold10689: 266394-268393 Boechera stricta
Bostr.10689s0045 5.0kb upstream 5.0kb upstream 8177 true Scaffold10689: 268394-276570 Boechera stricta
Bostr.10689s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold10689: 271571-276570 Boechera stricta
Bostr.10689s0045 5.0kb downstream 5.0kb downstream 8177 true Scaffold10689: 263394-271570 Boechera stricta
Bostr.10689s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold10689: 263394-268393 Boechera stricta
Bostr.10689s0045 10.0kb upstream 10.0kb upstream 13177 true Scaffold10689: 268394-281570 Boechera stricta
Bostr.10689s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold10689: 271571-281570 Boechera stricta
Bostr.10689s0045 10.0kb downstream 10.0kb downstream 13177 true Scaffold10689: 258394-271570 Boechera stricta
Bostr.10689s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold10689: 258394-268393 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377505 5261 Brassicaceae View MSA
123831545 5264 Brassicales-Malvales View MSA
124341286 5266 SBM View MSA
124237017 5268 Malvidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain