Gene : Bostr.10689s0077 B. stricta v1.2
Defline:  (1 of 2) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  77
Name:  ? Bostr.10689s0077 Secondary Identifier:  ? PAC:30674766
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PHOTOALL-PWY Boechera stricta pathologic  
Bstricta PWY-101 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10689s0077 0.5kb upstream 0.5kb upstream 2136 true Scaffold10689: 405169-407304 Boechera stricta
Bostr.10689s0077 0.5kb upstream 0.5kb upstream 500 false Scaffold10689: 405169-405668 Boechera stricta
Bostr.10689s0077 0.5kb downstream 0.5kb downstream 2136 true Scaffold10689: 405669-407804 Boechera stricta
Bostr.10689s0077 0.5kb downstream 0.5kb downstream 500 false Scaffold10689: 407305-407804 Boechera stricta
Bostr.10689s0077 1.0kb upstream 1.0kb upstream 2636 true Scaffold10689: 404669-407304 Boechera stricta
Bostr.10689s0077 1.0kb upstream 1.0kb upstream 1000 false Scaffold10689: 404669-405668 Boechera stricta
Bostr.10689s0077 1.0kb downstream 1.0kb downstream 2636 true Scaffold10689: 405669-408304 Boechera stricta
Bostr.10689s0077 1.0kb downstream 1.0kb downstream 1000 false Scaffold10689: 407305-408304 Boechera stricta
Bostr.10689s0077 2.0kb upstream 2.0kb upstream 3636 true Scaffold10689: 403669-407304 Boechera stricta
Bostr.10689s0077 2.0kb upstream 2.0kb upstream 2000 false Scaffold10689: 403669-405668 Boechera stricta
Bostr.10689s0077 2.0kb downstream 2.0kb downstream 3636 true Scaffold10689: 405669-409304 Boechera stricta
Bostr.10689s0077 2.0kb downstream 2.0kb downstream 2000 false Scaffold10689: 407305-409304 Boechera stricta
Bostr.10689s0077 5.0kb upstream 5.0kb upstream 6636 true Scaffold10689: 400669-407304 Boechera stricta
Bostr.10689s0077 5.0kb upstream 5.0kb upstream 5000 false Scaffold10689: 400669-405668 Boechera stricta
Bostr.10689s0077 5.0kb downstream 5.0kb downstream 6636 true Scaffold10689: 405669-412304 Boechera stricta
Bostr.10689s0077 5.0kb downstream 5.0kb downstream 5000 false Scaffold10689: 407305-412304 Boechera stricta
Bostr.10689s0077 10.0kb upstream 10.0kb upstream 11636 true Scaffold10689: 395669-407304 Boechera stricta
Bostr.10689s0077 10.0kb upstream 10.0kb upstream 10000 false Scaffold10689: 395669-405668 Boechera stricta
Bostr.10689s0077 10.0kb downstream 10.0kb downstream 11636 true Scaffold10689: 405669-417304 Boechera stricta
Bostr.10689s0077 10.0kb downstream 10.0kb downstream 10000 false Scaffold10689: 407305-417304 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364990 5261 Brassicaceae View MSA
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain