Gene : Bostr.10689s0099 B. stricta v1.2
Defline:  (1 of 2) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  99
Name:  ? Bostr.10689s0099 Secondary Identifier:  ? PAC:30674713
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5129 Boechera stricta pathologic  
Bstricta PWY-6483 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10689s0099 0.5kb upstream 0.5kb upstream 3641 true Scaffold10689: 546515-550155 Boechera stricta
Bostr.10689s0099 0.5kb upstream 0.5kb upstream 500 false Scaffold10689: 546515-547014 Boechera stricta
Bostr.10689s0099 0.5kb downstream 0.5kb downstream 3641 true Scaffold10689: 547015-550655 Boechera stricta
Bostr.10689s0099 0.5kb downstream 0.5kb downstream 500 false Scaffold10689: 550156-550655 Boechera stricta
Bostr.10689s0099 1.0kb upstream 1.0kb upstream 4141 true Scaffold10689: 546015-550155 Boechera stricta
Bostr.10689s0099 1.0kb upstream 1.0kb upstream 1000 false Scaffold10689: 546015-547014 Boechera stricta
Bostr.10689s0099 1.0kb downstream 1.0kb downstream 4141 true Scaffold10689: 547015-551155 Boechera stricta
Bostr.10689s0099 1.0kb downstream 1.0kb downstream 1000 false Scaffold10689: 550156-551155 Boechera stricta
Bostr.10689s0099 2.0kb upstream 2.0kb upstream 5141 true Scaffold10689: 545015-550155 Boechera stricta
Bostr.10689s0099 2.0kb upstream 2.0kb upstream 2000 false Scaffold10689: 545015-547014 Boechera stricta
Bostr.10689s0099 2.0kb downstream 2.0kb downstream 5141 true Scaffold10689: 547015-552155 Boechera stricta
Bostr.10689s0099 2.0kb downstream 2.0kb downstream 2000 false Scaffold10689: 550156-552155 Boechera stricta
Bostr.10689s0099 5.0kb upstream 5.0kb upstream 8141 true Scaffold10689: 542015-550155 Boechera stricta
Bostr.10689s0099 5.0kb upstream 5.0kb upstream 5000 false Scaffold10689: 542015-547014 Boechera stricta
Bostr.10689s0099 5.0kb downstream 5.0kb downstream 8141 true Scaffold10689: 547015-555155 Boechera stricta
Bostr.10689s0099 5.0kb downstream 5.0kb downstream 5000 false Scaffold10689: 550156-555155 Boechera stricta
Bostr.10689s0099 10.0kb upstream 10.0kb upstream 13141 true Scaffold10689: 537015-550155 Boechera stricta
Bostr.10689s0099 10.0kb upstream 10.0kb upstream 10000 false Scaffold10689: 537015-547014 Boechera stricta
Bostr.10689s0099 10.0kb downstream 10.0kb downstream 13141 true Scaffold10689: 547015-560155 Boechera stricta
Bostr.10689s0099 10.0kb downstream 10.0kb downstream 10000 false Scaffold10689: 550156-560155 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369288 5261 Brassicaceae View MSA
123827390 5264 Brassicales-Malvales View MSA
124339583 5266 SBM View MSA
124247883 5268 Malvidae View MSA
124066639 5270 Rosid View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain