Gene : Bostr.10273s0316 B. stricta v1.2

Defline:  (1 of 2) PTHR11002:SF15 - CARBONIC ANHYDRASE Genomic Order:  316
Name:  ? Bostr.10273s0316 Secondary Identifier:  ? PAC:30656503

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta CYANCAT-PWY Boechera stricta pathologic  
Bstricta PWY-241 Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  
Bstricta PWYQT-4429 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10273s0316 0.5kb upstream 0.5kb upstream 6146 true Scaffold10273: 1797049-1803194 Boechera stricta
Bostr.10273s0316 0.5kb upstream 0.5kb upstream 500 false Scaffold10273: 1797049-1797548 Boechera stricta
Bostr.10273s0316 0.5kb downstream 0.5kb downstream 6146 true Scaffold10273: 1797549-1803694 Boechera stricta
Bostr.10273s0316 0.5kb downstream 0.5kb downstream 500 false Scaffold10273: 1803195-1803694 Boechera stricta
Bostr.10273s0316 1.0kb upstream 1.0kb upstream 6646 true Scaffold10273: 1796549-1803194 Boechera stricta
Bostr.10273s0316 1.0kb upstream 1.0kb upstream 1000 false Scaffold10273: 1796549-1797548 Boechera stricta
Bostr.10273s0316 1.0kb downstream 1.0kb downstream 6646 true Scaffold10273: 1797549-1804194 Boechera stricta
Bostr.10273s0316 1.0kb downstream 1.0kb downstream 1000 false Scaffold10273: 1803195-1804194 Boechera stricta
Bostr.10273s0316 2.0kb upstream 2.0kb upstream 7646 true Scaffold10273: 1795549-1803194 Boechera stricta
Bostr.10273s0316 2.0kb upstream 2.0kb upstream 2000 false Scaffold10273: 1795549-1797548 Boechera stricta
Bostr.10273s0316 2.0kb downstream 2.0kb downstream 7646 true Scaffold10273: 1797549-1805194 Boechera stricta
Bostr.10273s0316 2.0kb downstream 2.0kb downstream 2000 false Scaffold10273: 1803195-1805194 Boechera stricta
Bostr.10273s0316 5.0kb upstream 5.0kb upstream 10646 true Scaffold10273: 1792549-1803194 Boechera stricta
Bostr.10273s0316 5.0kb upstream 5.0kb upstream 5000 false Scaffold10273: 1792549-1797548 Boechera stricta
Bostr.10273s0316 5.0kb downstream 5.0kb downstream 10646 true Scaffold10273: 1797549-1808194 Boechera stricta
Bostr.10273s0316 5.0kb downstream 5.0kb downstream 5000 false Scaffold10273: 1803195-1808194 Boechera stricta
Bostr.10273s0316 10.0kb upstream 10.0kb upstream 15646 true Scaffold10273: 1787549-1803194 Boechera stricta
Bostr.10273s0316 10.0kb upstream 10.0kb upstream 10000 false Scaffold10273: 1787549-1797548 Boechera stricta
Bostr.10273s0316 10.0kb downstream 10.0kb downstream 15646 true Scaffold10273: 1797549-1813194 Boechera stricta
Bostr.10273s0316 10.0kb downstream 10.0kb downstream 10000 false Scaffold10273: 1803195-1813194 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368688 5261 Brassicaceae View MSA
123837213 5264 Brassicales-Malvales View MSA
124349038 5266 SBM View MSA
124252567 5268 Malvidae View MSA
124069679 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain