Gene : Bostr.10273s0298 B. stricta v1.2

Defline:  (1 of 2) 2.6.1.4 - Glycine transaminase / Glycine aminotransferase Genomic Order:  298
Name:  ? Bostr.10273s0298 Secondary Identifier:  ? PAC:30656914

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta ALANINE-DEG3-PWY Boechera stricta pathologic  
Bstricta ALANINE-SYN2-PWY Boechera stricta pathologic  
Bstricta GLYSYN-ALA-PWY Boechera stricta pathologic  
Bstricta PWY-7115 Boechera stricta pathologic  
Bstricta PWY-7117 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.10273s0298 0.5kb upstream 0.5kb upstream 4264 true Scaffold10273: 1662832-1667095 Boechera stricta
Bostr.10273s0298 0.5kb upstream 0.5kb upstream 500 false Scaffold10273: 1666596-1667095 Boechera stricta
Bostr.10273s0298 0.5kb downstream 0.5kb downstream 4264 true Scaffold10273: 1662332-1666595 Boechera stricta
Bostr.10273s0298 0.5kb downstream 0.5kb downstream 500 false Scaffold10273: 1662332-1662831 Boechera stricta
Bostr.10273s0298 1.0kb upstream 1.0kb upstream 4764 true Scaffold10273: 1662832-1667595 Boechera stricta
Bostr.10273s0298 1.0kb upstream 1.0kb upstream 1000 false Scaffold10273: 1666596-1667595 Boechera stricta
Bostr.10273s0298 1.0kb downstream 1.0kb downstream 4764 true Scaffold10273: 1661832-1666595 Boechera stricta
Bostr.10273s0298 1.0kb downstream 1.0kb downstream 1000 false Scaffold10273: 1661832-1662831 Boechera stricta
Bostr.10273s0298 2.0kb upstream 2.0kb upstream 5764 true Scaffold10273: 1662832-1668595 Boechera stricta
Bostr.10273s0298 2.0kb upstream 2.0kb upstream 2000 false Scaffold10273: 1666596-1668595 Boechera stricta
Bostr.10273s0298 2.0kb downstream 2.0kb downstream 5764 true Scaffold10273: 1660832-1666595 Boechera stricta
Bostr.10273s0298 2.0kb downstream 2.0kb downstream 2000 false Scaffold10273: 1660832-1662831 Boechera stricta
Bostr.10273s0298 5.0kb upstream 5.0kb upstream 8764 true Scaffold10273: 1662832-1671595 Boechera stricta
Bostr.10273s0298 5.0kb upstream 5.0kb upstream 5000 false Scaffold10273: 1666596-1671595 Boechera stricta
Bostr.10273s0298 5.0kb downstream 5.0kb downstream 8764 true Scaffold10273: 1657832-1666595 Boechera stricta
Bostr.10273s0298 5.0kb downstream 5.0kb downstream 5000 false Scaffold10273: 1657832-1662831 Boechera stricta
Bostr.10273s0298 10.0kb upstream 10.0kb upstream 13764 true Scaffold10273: 1662832-1676595 Boechera stricta
Bostr.10273s0298 10.0kb upstream 10.0kb upstream 10000 false Scaffold10273: 1666596-1676595 Boechera stricta
Bostr.10273s0298 10.0kb downstream 10.0kb downstream 13764 true Scaffold10273: 1652832-1666595 Boechera stricta
Bostr.10273s0298 10.0kb downstream 10.0kb downstream 10000 false Scaffold10273: 1652832-1662831 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367941 5261 Brassicaceae View MSA
123836743 5264 Brassicales-Malvales View MSA
124342704 5266 SBM View MSA
124251035 5268 Malvidae View MSA
124064256 5270 Rosid View MSA
123749170 5271 Pentapetalae View MSA
122793882 5272 Eudicot View MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain