Gene : Bostr.13129s0060 B. stricta v1.2
Defline:  (1 of 1) PTHR11709:SF88 - LACCASE-14 Genomic Order:  60
Name:  ? Bostr.13129s0060 Secondary Identifier:  ? PAC:30673047
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-5466 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0060 0.5kb upstream 0.5kb upstream 2994 true Scaffold13129: 243291-246284 Boechera stricta
Bostr.13129s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 243291-243790 Boechera stricta
Bostr.13129s0060 0.5kb downstream 0.5kb downstream 2994 true Scaffold13129: 243791-246784 Boechera stricta
Bostr.13129s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 246285-246784 Boechera stricta
Bostr.13129s0060 1.0kb upstream 1.0kb upstream 3494 true Scaffold13129: 242791-246284 Boechera stricta
Bostr.13129s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 242791-243790 Boechera stricta
Bostr.13129s0060 1.0kb downstream 1.0kb downstream 3494 true Scaffold13129: 243791-247284 Boechera stricta
Bostr.13129s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 246285-247284 Boechera stricta
Bostr.13129s0060 2.0kb upstream 2.0kb upstream 4494 true Scaffold13129: 241791-246284 Boechera stricta
Bostr.13129s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 241791-243790 Boechera stricta
Bostr.13129s0060 2.0kb downstream 2.0kb downstream 4494 true Scaffold13129: 243791-248284 Boechera stricta
Bostr.13129s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 246285-248284 Boechera stricta
Bostr.13129s0060 5.0kb upstream 5.0kb upstream 7494 true Scaffold13129: 238791-246284 Boechera stricta
Bostr.13129s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 238791-243790 Boechera stricta
Bostr.13129s0060 5.0kb downstream 5.0kb downstream 7494 true Scaffold13129: 243791-251284 Boechera stricta
Bostr.13129s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 246285-251284 Boechera stricta
Bostr.13129s0060 10.0kb upstream 10.0kb upstream 12494 true Scaffold13129: 233791-246284 Boechera stricta
Bostr.13129s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 233791-243790 Boechera stricta
Bostr.13129s0060 10.0kb downstream 10.0kb downstream 12494 true Scaffold13129: 243791-256284 Boechera stricta
Bostr.13129s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 246285-256284 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370011 5261 Brassicaceae View MSA
123799883 5264 Brassicales-Malvales View MSA
124297361 5266 SBM View MSA
124253162 5268 Malvidae View MSA
124074925 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain