Gene : Bostr.13083s0061 B. stricta v1.2
Defline:  (1 of 2) PTHR22572:SF101 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE SMALL SUBUNIT, CHLOROPLASTIC Genomic Order:  61
Name:  ? Bostr.13083s0061 Secondary Identifier:  ? PAC:30664286
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta GLYCOGENSYNTH-PWY Boechera stricta pathologic  
Bstricta PWY-622 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13083s0061 0.5kb upstream 0.5kb upstream 3606 true Scaffold13083: 684134-687739 Boechera stricta
Bostr.13083s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold13083: 687240-687739 Boechera stricta
Bostr.13083s0061 0.5kb downstream 0.5kb downstream 3606 true Scaffold13083: 683634-687239 Boechera stricta
Bostr.13083s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold13083: 683634-684133 Boechera stricta
Bostr.13083s0061 1.0kb upstream 1.0kb upstream 4106 true Scaffold13083: 684134-688239 Boechera stricta
Bostr.13083s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold13083: 687240-688239 Boechera stricta
Bostr.13083s0061 1.0kb downstream 1.0kb downstream 4106 true Scaffold13083: 683134-687239 Boechera stricta
Bostr.13083s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold13083: 683134-684133 Boechera stricta
Bostr.13083s0061 2.0kb upstream 2.0kb upstream 5106 true Scaffold13083: 684134-689239 Boechera stricta
Bostr.13083s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold13083: 687240-689239 Boechera stricta
Bostr.13083s0061 2.0kb downstream 2.0kb downstream 5106 true Scaffold13083: 682134-687239 Boechera stricta
Bostr.13083s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold13083: 682134-684133 Boechera stricta
Bostr.13083s0061 5.0kb upstream 5.0kb upstream 8106 true Scaffold13083: 684134-692239 Boechera stricta
Bostr.13083s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold13083: 687240-692239 Boechera stricta
Bostr.13083s0061 5.0kb downstream 5.0kb downstream 8106 true Scaffold13083: 679134-687239 Boechera stricta
Bostr.13083s0061 5.0kb downstream 5.0kb downstream 5000 false Scaffold13083: 679134-684133 Boechera stricta
Bostr.13083s0061 10.0kb upstream 10.0kb upstream 13106 true Scaffold13083: 684134-697239 Boechera stricta
Bostr.13083s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold13083: 687240-697239 Boechera stricta
Bostr.13083s0061 10.0kb downstream 10.0kb downstream 13106 true Scaffold13083: 674134-687239 Boechera stricta
Bostr.13083s0061 10.0kb downstream 10.0kb downstream 10000 false Scaffold13083: 674134-684133 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362214 5261 Brassicaceae View MSA
123836919 5264 Brassicales-Malvales View MSA
124346329 5266 SBM View MSA
124239749 5268 Malvidae View MSA
124067564 5270 Rosid View MSA
123737587 5271 Pentapetalae View MSA
122787627 5272 Eudicot View MSA
122044250 5273 Angiosperm View MSA
121350002 5274 Embryophyte View MSA
123424956 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain