Gene : Bostr.13129s0005 B. stricta v1.2
Defline:  (1 of 3) 2.4.1.29 - Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  5
Name:  ? Bostr.13129s0005 Secondary Identifier:  ? PAC:30672864
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1001 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.13129s0005 0.5kb upstream 0.5kb upstream 5971 true Scaffold13129: 19588-25558 Boechera stricta
Bostr.13129s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold13129: 25059-25558 Boechera stricta
Bostr.13129s0005 0.5kb downstream 0.5kb downstream 5971 true Scaffold13129: 19088-25058 Boechera stricta
Bostr.13129s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold13129: 19088-19587 Boechera stricta
Bostr.13129s0005 1.0kb upstream 1.0kb upstream 6471 true Scaffold13129: 19588-26058 Boechera stricta
Bostr.13129s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold13129: 25059-26058 Boechera stricta
Bostr.13129s0005 1.0kb downstream 1.0kb downstream 6471 true Scaffold13129: 18588-25058 Boechera stricta
Bostr.13129s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold13129: 18588-19587 Boechera stricta
Bostr.13129s0005 2.0kb upstream 2.0kb upstream 7471 true Scaffold13129: 19588-27058 Boechera stricta
Bostr.13129s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold13129: 25059-27058 Boechera stricta
Bostr.13129s0005 2.0kb downstream 2.0kb downstream 7471 true Scaffold13129: 17588-25058 Boechera stricta
Bostr.13129s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold13129: 17588-19587 Boechera stricta
Bostr.13129s0005 5.0kb upstream 5.0kb upstream 10471 true Scaffold13129: 19588-30058 Boechera stricta
Bostr.13129s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold13129: 25059-30058 Boechera stricta
Bostr.13129s0005 5.0kb downstream 5.0kb downstream 10471 true Scaffold13129: 14588-25058 Boechera stricta
Bostr.13129s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold13129: 14588-19587 Boechera stricta
Bostr.13129s0005 10.0kb upstream 10.0kb upstream 15471 true Scaffold13129: 19588-35058 Boechera stricta
Bostr.13129s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold13129: 25059-35058 Boechera stricta
Bostr.13129s0005 10.0kb downstream 10.0kb downstream 15471 true Scaffold13129: 9588-25058 Boechera stricta
Bostr.13129s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold13129: 9588-19587 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373968 5261 Brassicaceae View MSA
123800654 5264 Brassicales-Malvales View MSA
124298044 5266 SBM View MSA
124149784 5268 Malvidae View MSA
123875523 5270 Rosid View MSA
123746162 5271 Pentapetalae View MSA
122771799 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain