Gene : Bostr.12659s0369 B. stricta v1.2
Defline:  (1 of 3) PTHR15245:SF11 - PHOSPHATIDYLINOSITOL 3-KINASE-RELATED PROTEIN KINASE Genomic Order:  369
Name:  ? Bostr.12659s0369 Secondary Identifier:  ? PAC:30652135
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6351 Boechera stricta pathologic  
Bstricta PWY-6352 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0369 0.5kb upstream 0.5kb upstream 3418 true Scaffold12659: 2010487-2013904 Boechera stricta
Bostr.12659s0369 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 2010487-2010986 Boechera stricta
Bostr.12659s0369 0.5kb downstream 0.5kb downstream 3418 true Scaffold12659: 2010987-2014404 Boechera stricta
Bostr.12659s0369 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 2013905-2014404 Boechera stricta
Bostr.12659s0369 1.0kb upstream 1.0kb upstream 3918 true Scaffold12659: 2009987-2013904 Boechera stricta
Bostr.12659s0369 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 2009987-2010986 Boechera stricta
Bostr.12659s0369 1.0kb downstream 1.0kb downstream 3918 true Scaffold12659: 2010987-2014904 Boechera stricta
Bostr.12659s0369 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 2013905-2014904 Boechera stricta
Bostr.12659s0369 2.0kb upstream 2.0kb upstream 4918 true Scaffold12659: 2008987-2013904 Boechera stricta
Bostr.12659s0369 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 2008987-2010986 Boechera stricta
Bostr.12659s0369 2.0kb downstream 2.0kb downstream 4918 true Scaffold12659: 2010987-2015904 Boechera stricta
Bostr.12659s0369 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 2013905-2015904 Boechera stricta
Bostr.12659s0369 5.0kb upstream 5.0kb upstream 7918 true Scaffold12659: 2005987-2013904 Boechera stricta
Bostr.12659s0369 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 2005987-2010986 Boechera stricta
Bostr.12659s0369 5.0kb downstream 5.0kb downstream 7918 true Scaffold12659: 2010987-2018904 Boechera stricta
Bostr.12659s0369 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 2013905-2018904 Boechera stricta
Bostr.12659s0369 10.0kb upstream 10.0kb upstream 12918 true Scaffold12659: 2000987-2013904 Boechera stricta
Bostr.12659s0369 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 2000987-2010986 Boechera stricta
Bostr.12659s0369 10.0kb downstream 10.0kb downstream 12918 true Scaffold12659: 2010987-2023904 Boechera stricta
Bostr.12659s0369 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 2013905-2023904 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364725 5261 Brassicaceae View MSA
123837986 5264 Brassicales-Malvales View MSA
124342146 5266 SBM View MSA
124253244 5268 Malvidae View MSA
124068330 5270 Rosid View MSA
123741800 5271 Pentapetalae View MSA
122793394 5272 Eudicot View MSA
122050959 5273 Angiosperm View MSA
121351687 5274 Embryophyte View MSA
123427554 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain