Gene : Bostr.12837s0001 B. stricta v1.2
Defline:  (1 of 1) PTHR15184:SF3 - ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL Genomic Order:  1
Name:  ? Bostr.12837s0001 Secondary Identifier:  ? PAC:30652096
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6126 Boechera stricta pathologic  
Bstricta PWY-7219 Boechera stricta pathologic  
Bstricta PWY-7229 Boechera stricta pathologic  
Bstricta PWY-841 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12837s0001 0.5kb upstream 0.5kb upstream 2070 true Scaffold12837: 607-2676 Boechera stricta
Bostr.12837s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold12837: 2177-2676 Boechera stricta
Bostr.12837s0001 0.5kb downstream 0.5kb downstream 2070 true Scaffold12837: 107-2176 Boechera stricta
Bostr.12837s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold12837: 107-606 Boechera stricta
Bostr.12837s0001 1.0kb upstream 1.0kb upstream 2570 true Scaffold12837: 607-3176 Boechera stricta
Bostr.12837s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold12837: 2177-3176 Boechera stricta
Bostr.12837s0001 1.0kb downstream 1.0kb downstream 2176 true Scaffold12837: 1-2176 Boechera stricta
Bostr.12837s0001 1.0kb downstream 1.0kb downstream 606 false Scaffold12837: 1-606 Boechera stricta
Bostr.12837s0001 2.0kb upstream 2.0kb upstream 3570 true Scaffold12837: 607-4176 Boechera stricta
Bostr.12837s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold12837: 2177-4176 Boechera stricta
Bostr.12837s0001 2.0kb downstream 2.0kb downstream 2176 true Scaffold12837: 1-2176 Boechera stricta
Bostr.12837s0001 2.0kb downstream 2.0kb downstream 606 false Scaffold12837: 1-606 Boechera stricta
Bostr.12837s0001 5.0kb upstream 5.0kb upstream 6570 true Scaffold12837: 607-7176 Boechera stricta
Bostr.12837s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold12837: 2177-7176 Boechera stricta
Bostr.12837s0001 5.0kb downstream 5.0kb downstream 2176 true Scaffold12837: 1-2176 Boechera stricta
Bostr.12837s0001 5.0kb downstream 5.0kb downstream 606 false Scaffold12837: 1-606 Boechera stricta
Bostr.12837s0001 10.0kb upstream 10.0kb upstream 7708 true Scaffold12837: 607-8314 Boechera stricta
Bostr.12837s0001 10.0kb upstream 10.0kb upstream 6138 false Scaffold12837: 2177-8314 Boechera stricta
Bostr.12837s0001 10.0kb downstream 10.0kb downstream 2176 true Scaffold12837: 1-2176 Boechera stricta
Bostr.12837s0001 10.0kb downstream 10.0kb downstream 606 false Scaffold12837: 1-606 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344127 5261 Brassicaceae View MSA
123837231 5264 Brassicales-Malvales View MSA
124322265 5266 SBM View MSA
124253426 5268 Malvidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain