Gene : Bostr.12659s0363 B. stricta v1.2
Defline:  (1 of 2) PTHR33403:SF1 - PROTEIN SPIRAL1 Genomic Order:  363
Name:  ? Bostr.12659s0363 Secondary Identifier:  ? PAC:30652450
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0363 0.5kb upstream 0.5kb upstream 2385 true Scaffold12659: 1972630-1975014 Boechera stricta
Bostr.12659s0363 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 1972630-1973129 Boechera stricta
Bostr.12659s0363 0.5kb downstream 0.5kb downstream 2385 true Scaffold12659: 1973130-1975514 Boechera stricta
Bostr.12659s0363 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 1975015-1975514 Boechera stricta
Bostr.12659s0363 1.0kb upstream 1.0kb upstream 2885 true Scaffold12659: 1972130-1975014 Boechera stricta
Bostr.12659s0363 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 1972130-1973129 Boechera stricta
Bostr.12659s0363 1.0kb downstream 1.0kb downstream 2885 true Scaffold12659: 1973130-1976014 Boechera stricta
Bostr.12659s0363 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 1975015-1976014 Boechera stricta
Bostr.12659s0363 2.0kb upstream 2.0kb upstream 3885 true Scaffold12659: 1971130-1975014 Boechera stricta
Bostr.12659s0363 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 1971130-1973129 Boechera stricta
Bostr.12659s0363 2.0kb downstream 2.0kb downstream 3885 true Scaffold12659: 1973130-1977014 Boechera stricta
Bostr.12659s0363 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 1975015-1977014 Boechera stricta
Bostr.12659s0363 5.0kb upstream 5.0kb upstream 6885 true Scaffold12659: 1968130-1975014 Boechera stricta
Bostr.12659s0363 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 1968130-1973129 Boechera stricta
Bostr.12659s0363 5.0kb downstream 5.0kb downstream 6885 true Scaffold12659: 1973130-1980014 Boechera stricta
Bostr.12659s0363 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 1975015-1980014 Boechera stricta
Bostr.12659s0363 10.0kb upstream 10.0kb upstream 11885 true Scaffold12659: 1963130-1975014 Boechera stricta
Bostr.12659s0363 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 1963130-1973129 Boechera stricta
Bostr.12659s0363 10.0kb downstream 10.0kb downstream 11885 true Scaffold12659: 1973130-1985014 Boechera stricta
Bostr.12659s0363 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 1975015-1985014 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377956 5261 Brassicaceae View MSA
123833538 5264 Brassicales-Malvales View MSA
124345469 5266 SBM View MSA
124239530 5268 Malvidae View MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain