Gene : Bostr.12659s0206 B. stricta v1.2
Defline:  (1 of 2) PTHR31375:SF29 - PECTIN LYASE-LIKE PROTEIN-RELATED Genomic Order:  206
Name:  ? Bostr.12659s0206 Secondary Identifier:  ? PAC:30652487
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0206 0.5kb upstream 0.5kb upstream 3231 true Scaffold12659: 1150064-1153294 Boechera stricta
Bostr.12659s0206 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 1150064-1150563 Boechera stricta
Bostr.12659s0206 0.5kb downstream 0.5kb downstream 3231 true Scaffold12659: 1150564-1153794 Boechera stricta
Bostr.12659s0206 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 1153295-1153794 Boechera stricta
Bostr.12659s0206 1.0kb upstream 1.0kb upstream 3731 true Scaffold12659: 1149564-1153294 Boechera stricta
Bostr.12659s0206 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 1149564-1150563 Boechera stricta
Bostr.12659s0206 1.0kb downstream 1.0kb downstream 3731 true Scaffold12659: 1150564-1154294 Boechera stricta
Bostr.12659s0206 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 1153295-1154294 Boechera stricta
Bostr.12659s0206 2.0kb upstream 2.0kb upstream 4731 true Scaffold12659: 1148564-1153294 Boechera stricta
Bostr.12659s0206 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 1148564-1150563 Boechera stricta
Bostr.12659s0206 2.0kb downstream 2.0kb downstream 4731 true Scaffold12659: 1150564-1155294 Boechera stricta
Bostr.12659s0206 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 1153295-1155294 Boechera stricta
Bostr.12659s0206 5.0kb upstream 5.0kb upstream 7731 true Scaffold12659: 1145564-1153294 Boechera stricta
Bostr.12659s0206 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 1145564-1150563 Boechera stricta
Bostr.12659s0206 5.0kb downstream 5.0kb downstream 7731 true Scaffold12659: 1150564-1158294 Boechera stricta
Bostr.12659s0206 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 1153295-1158294 Boechera stricta
Bostr.12659s0206 10.0kb upstream 10.0kb upstream 12731 true Scaffold12659: 1140564-1153294 Boechera stricta
Bostr.12659s0206 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 1140564-1150563 Boechera stricta
Bostr.12659s0206 10.0kb downstream 10.0kb downstream 12731 true Scaffold12659: 1150564-1163294 Boechera stricta
Bostr.12659s0206 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 1153295-1163294 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378223 5261 Brassicaceae View MSA
123801793 5264 Brassicales-Malvales View MSA
124299053 5266 SBM View MSA
124254286 5268 Malvidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain