Gene : Bostr.12659s0052 B. stricta v1.2
Defline:  (1 of 4) PTHR23086:SF33 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 1-RELATED Genomic Order:  52
Name:  ? Bostr.12659s0052 Secondary Identifier:  ? PAC:30652483
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-6351 Boechera stricta pathologic  
Bstricta PWY-6352 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.12659s0052 0.5kb upstream 0.5kb upstream 4494 true Scaffold12659: 291095-295588 Boechera stricta
Bostr.12659s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold12659: 291095-291594 Boechera stricta
Bostr.12659s0052 0.5kb downstream 0.5kb downstream 4494 true Scaffold12659: 291595-296088 Boechera stricta
Bostr.12659s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold12659: 295589-296088 Boechera stricta
Bostr.12659s0052 1.0kb upstream 1.0kb upstream 4994 true Scaffold12659: 290595-295588 Boechera stricta
Bostr.12659s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold12659: 290595-291594 Boechera stricta
Bostr.12659s0052 1.0kb downstream 1.0kb downstream 4994 true Scaffold12659: 291595-296588 Boechera stricta
Bostr.12659s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold12659: 295589-296588 Boechera stricta
Bostr.12659s0052 2.0kb upstream 2.0kb upstream 5994 true Scaffold12659: 289595-295588 Boechera stricta
Bostr.12659s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold12659: 289595-291594 Boechera stricta
Bostr.12659s0052 2.0kb downstream 2.0kb downstream 5994 true Scaffold12659: 291595-297588 Boechera stricta
Bostr.12659s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold12659: 295589-297588 Boechera stricta
Bostr.12659s0052 5.0kb upstream 5.0kb upstream 8994 true Scaffold12659: 286595-295588 Boechera stricta
Bostr.12659s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold12659: 286595-291594 Boechera stricta
Bostr.12659s0052 5.0kb downstream 5.0kb downstream 8994 true Scaffold12659: 291595-300588 Boechera stricta
Bostr.12659s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold12659: 295589-300588 Boechera stricta
Bostr.12659s0052 10.0kb upstream 10.0kb upstream 13994 true Scaffold12659: 281595-295588 Boechera stricta
Bostr.12659s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold12659: 281595-291594 Boechera stricta
Bostr.12659s0052 10.0kb downstream 10.0kb downstream 13994 true Scaffold12659: 291595-305588 Boechera stricta
Bostr.12659s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold12659: 295589-305588 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362855 5261 Brassicaceae View MSA
123836752 5264 Brassicales-Malvales View MSA
124343464 5266 SBM View MSA
124238939 5268 Malvidae View MSA
124061441 5270 Rosid View MSA
123746948 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain